CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZBTB18
(
Pteropus vampyrus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPVAG00000011441
T108680_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB18
M02916_2.00
Homo sapiens
VMACATCTGGAWN
NWTCCAGATGTKB
SELEX
Jolma et al.(2013)
ZNF238_1
0.827
1.000
ZBTB18
M02917_2.00
Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN
SELEX
Jolma et al.(2013)
ZNF238_2
0.827
1.000
ZBTB18
M04585_2.00
Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN
SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX
0.827
1.000
ZBTB18
M08350_2.00
Homo sapiens
MRCAKCTGG
CCAGMTGYK
ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE
0.827
1.000
ZBTB18
M08257_2.00
Homo sapiens
NMGCAGCTGCKB
VMGCAGCTGCKN
ChIP-seq
Najafabadi et al.(2015b)
ZNF238
0.827
1.000
ZBTB18
M08928_2.00
Homo sapiens
VMRCAKCTGGV
BCCAGMTGYKB
Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C
0.827
1.000
ZBTB18
M10282_2.00
Homo sapiens
NNMACATCTGGM
KCCAGATGTKNN
Transfac
Matys et al.(2006)
V$RP58_01
0.827
1.000
ZBTB18
M10283_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RP58_Q3
0.827
1.000
ZBTB18
M04586_2.00
Homo sapiens
NMACATCTGBHNN
NNDVCAGATGTKN
SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000010784
C2H2 ZF
379
401
FMCPLCNKVFPSPHILQIHLSTH
ENSPVAP00000010784
C2H2 ZF
420
441
TCSLCGKTFSCMYTLKRHERTH
ENSPVAP00000010784
C2H2 ZF
447
469
YTCTQCGKSFQYSHNLSRHAVVH
ENSPVAP00000010784
C2H2 ZF
475
498
HACKWCERRFTQSGDLYRHIRKFH
Links
Other
C2H2 ZF
family TFs
Other
Pteropus vampyrus
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0001009801
Angiostrongylus costaricensis
ACOC_0001009801
I
0.000
ASU_05583
Ascaris suum
ASU_05583
I
0.000
Bm5392
Brugia malayi
Bm5392
I
0.000
BTMF_0000986201
Brugia timori
BTMF_0000986201
I
0.000
CRE28480
Caenorhabditis remanei
CRE28480
I
0.000
daf-16
Caenorhabditis elegans
WBGene00000912
D
0.000
GPLIN_001276900
Globodera pallida
GPLIN_001276900
I
0.000
L596_g21623
Steinernema carpocapsae
L596_g21623
I
0.000
L889_g26642
Steinernema feltiae
L889_g26642
I
0.000
L892_g28207
Steinernema scapterisci
L892_g28207
I
0.000
L893_g8649
Steinernema glaseri
L893_g8649
I
0.000
MhA1_Contig353.frz3.fgene4
Meloidogyne hapla
MhA1_Contig353.frz3.fgene4
I
0.000
nAv.1.0.1.g02965
Acanthocheilonema viteae
nAv.1.0.1.g02965
I
0.000
nDi.2.2.2.g01961
Dirofilaria immitis
nDi.2.2.2.g01961
I
0.000
nLs.2.1.2.g00563
Litomosoides sigmodontis
nLs.2.1.2.g00563
I
0.000
nOo.2.0.1.g05753
Onchocerca ochengi
nOo.2.0.1.g05753
I
0.000
nOo.2.0.1.g07140
Onchocerca ochengi
nOo.2.0.1.g07140
I
0.000
OFLC_0000193701
Onchocerca flexuosa
OFLC_0000193701
I
0.000
PTRK_0000872800
Parastrongyloides trichosuri
PTRK_0000872800
I
0.000
RSKR_0000006600
Rhabditophanes kr3021
RSKR_0000006600
I
0.000
SMUV_0000148401
Syphacia muris
SMUV_0000148401
I
0.000
snap_masked-nMf.1.1.scaf25582-processed-gene-0.1
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf25582-processed-gene-0.1
I
0.000
SPAL_0000140300
Strongyloides papillosus
SPAL_0000140300
I
0.000
SVE_0221800
Strongyloides venezuelensis
SVE_0221800
I
0.000
TCLT_0000249001
Thelazia callipaeda
TCLT_0000249001
I
0.000
TCNE_0000984601
Toxocara canis
TCNE_0000984601
I
0.000
WBGene00237302
Onchocerca volvulus
WBGene00237302
I
0.000
WUBG_10392
Wuchereria bancrofti
WUBG_10392
I
0.000