ZBTB18 (Pteropus vampyrus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPVAG00000011441 T108680_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBTB18
M02916_2.00
Homo sapiens
VMACATCTGGAWN

NWTCCAGATGTKB
SELEX
Jolma et al.(2013)
ZNF238_1
0.827 1.000
ZBTB18
M02917_2.00
Homo sapiens
NMACATCTGGMHN

NDKCCAGATGTKN
SELEX
Jolma et al.(2013)
ZNF238_2
0.827 1.000
ZBTB18
M04585_2.00
Homo sapiens
NMACATCTGGMHN

NDKCCAGATGTKN
SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX
0.827 1.000
ZBTB18
M08350_2.00
Homo sapiens
MRCAKCTGG

CCAGMTGYK
ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE
0.827 1.000
ZBTB18
M08257_2.00
Homo sapiens
NMGCAGCTGCKB

VMGCAGCTGCKN
ChIP-seq
Najafabadi et al.(2015b)
ZNF238
0.827 1.000
ZBTB18
M08928_2.00
Homo sapiens
VMRCAKCTGGV

BCCAGMTGYKB
Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C
0.827 1.000
ZBTB18
M10282_2.00
Homo sapiens
NNMACATCTGGM

KCCAGATGTKNN
Transfac
Matys et al.(2006)
V$RP58_01
0.827 1.000
ZBTB18
M10283_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RP58_Q3
0.827 1.000
ZBTB18
M04586_2.00
Homo sapiens
NMACATCTGBHNN

NNDVCAGATGTKN
SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000010784 C2H2 ZF 379 401
ENSPVAP00000010784 C2H2 ZF 420 441
ENSPVAP00000010784 C2H2 ZF 447 469
ENSPVAP00000010784 C2H2 ZF 475 498

Links

Other C2H2 ZF family TFs
Other Pteropus vampyrus TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACOC_0001009801 Angiostrongylus costaricensis ACOC_0001009801 I 0.000
ASU_05583 Ascaris suum ASU_05583 I 0.000
Bm5392 Brugia malayi Bm5392 I 0.000
BTMF_0000986201 Brugia timori BTMF_0000986201 I 0.000
CRE28480 Caenorhabditis remanei CRE28480 I 0.000
daf-16 Caenorhabditis elegans WBGene00000912 D 0.000
GPLIN_001276900 Globodera pallida GPLIN_001276900 I 0.000
L596_g21623 Steinernema carpocapsae L596_g21623 I 0.000
L889_g26642 Steinernema feltiae L889_g26642 I 0.000
L892_g28207 Steinernema scapterisci L892_g28207 I 0.000
L893_g8649 Steinernema glaseri L893_g8649 I 0.000
MhA1_Contig353.frz3.fgene4 Meloidogyne hapla MhA1_Contig353.frz3.fgene4 I 0.000
nAv.1.0.1.g02965 Acanthocheilonema viteae nAv.1.0.1.g02965 I 0.000
nDi.2.2.2.g01961 Dirofilaria immitis nDi.2.2.2.g01961 I 0.000
nLs.2.1.2.g00563 Litomosoides sigmodontis nLs.2.1.2.g00563 I 0.000
nOo.2.0.1.g05753 Onchocerca ochengi nOo.2.0.1.g05753 I 0.000
nOo.2.0.1.g07140 Onchocerca ochengi nOo.2.0.1.g07140 I 0.000
OFLC_0000193701 Onchocerca flexuosa OFLC_0000193701 I 0.000
PTRK_0000872800 Parastrongyloides trichosuri PTRK_0000872800 I 0.000
RSKR_0000006600 Rhabditophanes kr3021 RSKR_0000006600 I 0.000
SMUV_0000148401 Syphacia muris SMUV_0000148401 I 0.000
snap_masked-nMf.1.1.scaf25582-processed-gene-0.1 Meloidogyne floridensis snap_masked-nMf.1.1.scaf25582-processed-gene-0.1 I 0.000
SPAL_0000140300 Strongyloides papillosus SPAL_0000140300 I 0.000
SVE_0221800 Strongyloides venezuelensis SVE_0221800 I 0.000
TCLT_0000249001 Thelazia callipaeda TCLT_0000249001 I 0.000
TCNE_0000984601 Toxocara canis TCNE_0000984601 I 0.000
WBGene00237302 Onchocerca volvulus WBGene00237302 I 0.000
WUBG_10392 Wuchereria bancrofti WUBG_10392 I 0.000