Ctcfl (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000028661 T109155_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ctcfl
M09015_2.00 		Mus musculus
VBRGCGCCCCCTRSHGGN
NCCDSYAGGGGGCGCYVB		 Misc
Kulakovskiy et al.(2013)
CTCFL_MOUSE.H11MO.0.A 		0.810 0.933
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000034635 C2H2 ZF 255 277
ENSRNOP00000034635 C2H2 ZF 283 305
ENSRNOP00000034635 C2H2 ZF 311 334
ENSRNOP00000034635 C2H2 ZF 340 362
ENSRNOP00000034635 C2H2 ZF 368 390
ENSRNOP00000034635 C2H2 ZF 396 419
ENSRNOP00000034635 C2H2 ZF 426 449
ENSRNOP00000034635 C2H2 ZF 456 478
ENSRNOP00000034635 C2H2 ZF 484 506
ENSRNOP00000034635 C2H2 ZF 512 535
ENSRNOP00000034635 C2H2 ZF 544 565

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000053387-D1 Bos grunniens ENSBTAP00000053387-D1 I
ENSCSAG00000014693 Chlorocebus sabaeus ENSCSAG00000014693 I
ENSMPUG00000017610 Mustela putorius furo ENSMPUG00000017610 I
ENSPPYG00000011082 Pongo abelii ENSPPYG00000011082 I
ENSSTOG00000006323 Ictidomys tridecemlineatus ENSSTOG00000006323 I
Myotis_brandtii_ZNF335_10013703 Myotis brandtii Myotis_brandtii_ZNF335_10013703 I
Zfp335 Dipodomys ordii ENSDORG00000007083 I
Zfp335 Mus musculus ENSMUSG00000039834 D
Zfp335 Rattus norvegicus ENSRNOG00000017290 I
ZNF335 Otolemur garnettii ENSOGAG00000015292 I
ZNF335 Bos taurus ENSBTAG00000010130 I
ZNF335 Canis familiaris ENSCAFG00000009882 I
ZNF335 Tursiops truncatus ENSTTRG00000012103 I
ZNF335 Callithrix jacchus ENSCJAG00000017215 I
ZNF335 Pteropus vampyrus ENSPVAG00000000383 I
ZNF335 Pan troglodytes ENSPTRG00000023353 I
ZNF335 Cavia porcellus ENSCPOG00000000138 I
ZNF335 Equus caballus ENSECAG00000023647 I
ZNF335 Oryctolagus cuniculus ENSOCUG00000016059 I
ZNF335 Myotis lucifugus ENSMLUG00000000282 I
ZNF335 Loxodonta africana ENSLAFG00000016142 I
ZNF335 Gorilla gorilla ENSGGOG00000013550 I
ZNF335 Homo sapiens ENSG00000198026 D