CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zkscan4
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000051823
T109315_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000073850
C2H2 ZF
168
190
FYCHECGKSFAQSSGLTKHKRIH
ENSRNOP00000073850
C2H2 ZF
196
218
YECEDCGKTFIGSSALVIHQRVH
ENSRNOP00000073850
C2H2 ZF
224
246
YECEECGKVFSHSSNLIKHQRTH
ENSRNOP00000073850
C2H2 ZF
252
274
YECDDCGKTFTQSCSLLEHHKIH
ENSRNOP00000073850
C2H2 ZF
280
302
FQCNLCGKAFRRSSHLLRHQRIH
ENSRNOP00000073850
C2H2 ZF
335
357
YQCNECERSFTRSRSLIEHKKIH
ENSRNOP00000073850
C2H2 ZF
363
385
YQCDACGKGFTRTSYLVQHRRSH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI009396
Acyrthosiphon pisum
ACYPI009396
I
CG12769
Drosophila melanogaster
FBgn0033252
D
GA11802
Drosophila pseudoobscura
FBgn0071851
N
GD10197
Drosophila simulans
FBgn0181972
I
GE23366
Drosophila yakuba
FBgn0240559
I
GG10683
Drosophila erecta
FBgn0102989
I
GH19993
Drosophila grimshawi
FBgn0127457
I
GJ20233
Drosophila virilis
FBgn0207373
I
GK23165
Drosophila willistoni
FBgn0225127
I
GM20729
Drosophila sechellia
FBgn0175610
I
HMEL006202
Heliconius melpomene
HMEL006202
I
LLOJ002369
Lutzomyia longipalpis
LLOJ002369
I
MCINX005153
Melitaea cinxia
MCINX005153
I