CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zkscan4
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000051823
T109315_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000073850
C2H2 ZF
168
190
FYCHECGKSFAQSSGLTKHKRIH
ENSRNOP00000073850
C2H2 ZF
196
218
YECEDCGKTFIGSSALVIHQRVH
ENSRNOP00000073850
C2H2 ZF
224
246
YECEECGKVFSHSSNLIKHQRTH
ENSRNOP00000073850
C2H2 ZF
252
274
YECDDCGKTFTQSCSLLEHHKIH
ENSRNOP00000073850
C2H2 ZF
280
302
FQCNLCGKAFRRSSHLLRHQRIH
ENSRNOP00000073850
C2H2 ZF
335
357
YQCNECERSFTRSRSLIEHKKIH
ENSRNOP00000073850
C2H2 ZF
363
385
YQCDACGKGFTRTSYLVQHRRSH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZKSCAN4
Choloepus hoffmanni
ENSCHOG00000011850
N
0.803
ZKSCAN4
Dasypus novemcinctus
ENSDNOG00000047646
N
0.803
ZKSCAN4
Microcebus murinus
ENSMICG00000010462
N
0.802
ZKSCAN4
Vicugna pacos
ENSVPAG00000000031
N
0.802
ZKSCAN4
Homo sapiens
ENSG00000187626
N
0.800
ZKSCAN4
Gorilla gorilla
ENSGGOG00000009487
N
0.800
ENSMMUG00000002534
Macaca mulatta
ENSMMUG00000002534
N
0.800
ENSPANG00000026499
Papio anubis
ENSPANG00000026499
N
0.800
ENSPPYG00000016367
Pongo abelii
ENSPPYG00000016367
N
0.800
ZKSCAN4
Pan troglodytes
ENSPTRG00000017871
N
0.800
ENSP00000366509
Macaca fascicularis
ENSP00000366509
N
0.800
Zkscan4
Mus musculus
ENSMUSG00000054931
N
0.798
ENSNLEG00000027084
Nomascus leucogenys
ENSNLEG00000027084
N
0.798
ZKSCAN4
Equus caballus
ENSECAG00000020013
N
0.797
ENSAMEG00000003183
Ailuropoda melanoleuca
ENSAMEG00000003183
N
0.795
ZKSCAN4
Bos taurus
ENSBTAG00000003575
N
0.794
ENSMPUG00000001306
Mustela putorius furo
ENSMPUG00000001306
N
0.794
ENSOARG00000017908
Ovis aries
ENSOARG00000017908
N
0.794
ENSTSYG00000007416
Tarsius syrichta
ENSTSYG00000007416
N
0.794
ZKSCAN4
Callithrix jacchus
ENSCJAG00000018650
N
0.793
ENSSTOG00000003661
Ictidomys tridecemlineatus
ENSSTOG00000003661
N
0.793
ZKSCAN4
Canis familiaris
ENSCAFG00000025091
N
0.791
ZKSCAN4
Tursiops truncatus
ENSTTRG00000015632
N
0.787
ZKSCAN4
Sus scrofa
ENSSSCG00000001204
N
0.785
ENSPCAG00000000195
Procavia capensis
ENSPCAG00000000195
N
0.781
ZKSCAN4
Oryctolagus cuniculus
ENSOCUG00000016433
N
0.779
ENSDORG00000014249
Dipodomys ordii
ENSDORG00000014249
N
0.769