ENSSSCG00000026570 (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000026570 T110551_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.819 0.974
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.819 0.974
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.819 0.974
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.819 0.974
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.819 0.974
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.819 0.974
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.819 0.974
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.819 0.974
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.819 0.974
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.819 0.974
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.819 0.974
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.819 0.974
SNAI2
M00222_2.00 		Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I 		0.815 0.965
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.767 0.816
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000006683 C2H2 ZF 128 150
ENSSSCP00000006683 C2H2 ZF 159 181
ENSSSCP00000006683 C2H2 ZF 185 207
ENSSSCP00000006683 C2H2 ZF 213 235
ENSSSCP00000006683 C2H2 ZF 241 262

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP13085 Atta cephalotes ACEP13085 I 0.000
BGIBMGA006230 Bombyx mori BGIBMGA006230 I 0.000
CapteG76255 Capitella teleta CapteG76255 I 0.767
Cflo_07707--XP_393944.1_APIME Camponotus floridanus Cflo_07707--XP_393944.1_APIME I 0.000
CGI_10027813 Crassostrea gigas CGI_10027813 I 0.000
CLEC007039 Cimex lectularius CLEC007039 I 0.000
ENSGMOG00000002669 Gadus morhua ENSGMOG00000002669 I 0.805
ENSLOCG00000005992 Lepisosteus oculatus ENSLOCG00000005992 I 0.805
ENSONIG00000009542 Oreochromis niloticus ENSONIG00000009542 I 0.805
ENSPFOG00000014336 Poecilia formosa ENSPFOG00000014336 I 0.803
ENSXMAG00000019030 Xiphophorus maculatus ENSXMAG00000019030 I 0.803
esg Drosophila melanogaster FBgn0001981 D 0.767
estExt_fgenesh2_kg.C_190001 Branchiostoma floridae estExt_fgenesh2_kg.C_190001 I 0.000
GA17666 Drosophila pseudoobscura FBgn0077676 I 0.767
GA17994 Drosophila pseudoobscura FBgn0078003 I 0.000
GD21956 Drosophila simulans FBgn0193371 I 0.000
GD24004 Drosophila simulans FBgn0195364 I 0.757
GE19402 Drosophila yakuba FBgn0236745 I 0.000
GE20968 Drosophila yakuba FBgn0238253 I 0.767
GF14525 Drosophila ananassae FBgn0091552 I 0.000
GF15382 Drosophila ananassae FBgn0092407 I 0.767
GG24207 Drosophila erecta FBgn0116339 I 0.000
GG25158 Drosophila erecta FBgn0117283 I 0.767
GH13119 Drosophila grimshawi FBgn0120596 I 0.000
GH13754 Drosophila grimshawi FBgn0121230 I 0.769
GI17894 Drosophila mojavensis FBgn0140635 I 0.769
GI22651 Drosophila mojavensis FBgn0145379 I 0.000
GJ17399 Drosophila virilis FBgn0204571 I 0.769
GJ23203 Drosophila virilis FBgn0210305 I 0.000
GK18133 Drosophila willistoni FBgn0220132 I 0.769
GK18253 Drosophila willistoni FBgn0220252 I 0.000
GL26425 Drosophila persimilis FBgn0164007 I 0.767
GL26594 Drosophila persimilis FBgn0164176 I 0.000
GM14357 Drosophila sechellia FBgn0169282 I 0.000
HHAL006775-PA Halyomorpha halys HHAL006775-PA I 0.000
HMEL002306 Heliconius melpomene HMEL002306 I 0.757
KGM_17970 Danaus plexippus KGM_17970 I 0.757
L798_10614 Zootermopsis nevadensis L798_10614 I 0.757
LCUP006862 Lucilia cuprina LCUP006862 I 0.000
LCUP013268 Lucilia cuprina LCUP013268 I 0.772
LDEC001157 Leptinotarsa decemlineata LDEC001157 I 0.769
LotgiG114290 Lottia gigantea LotgiG114290 I 0.761
MCINX001355 Melitaea cinxia MCINX001355 I 0.757
MDOA006149 Musca domestica MDOA006149 I 0.000
MDOA014024 Musca domestica MDOA014024 I 0.772
NV17743 Nasonia vitripennis NV17743 I 0.000
PPAI008011 Phlebotomus papatasi PPAI008011 I 0.756
RPRC005707 Rhodnius prolixus RPRC005707 I 0.000
Sakowv30043351m.g Saccoglossus kowalevskii Sakowv30043351m.g I 0.764
SINV14155 Solenopsis invicta SINV14155 I 0.000
SMAR001314 Strigamia maritima SMAR001314 I 0.000
SMAR001730 Strigamia maritima SMAR001730 I 0.000
snai2 Oryzias latipes ENSORLG00000017475 I 0.805
snai2 Gasterosteus aculeatus ENSGACG00000017935 I 0.803
snai2 Danio rerio ENSDARG00000040046 I 0.803
snai2 Takifugu rubripes ENSTRUG00000006860 I 0.805
snai2 Tetraodon nigroviridis ENSTNIG00000008504 I 0.805
TC014474 Tribolium castaneum TC014474 I 0.767
tetur13g00760 Tetranychus urticae tetur13g00760 I 0.000
wor Drosophila melanogaster FBgn0001983 D 0.000
YQE_07640 Dendroctonus ponderosae YQE_07640 I 0.000