CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ZNF239
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000029576
T110603_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000025553
C2H2 ZF
21
43
YRCSQCGRDFSERSELVLHQRDH
ENSSSCP00000025553
C2H2 ZF
49
71
FRCDHCGKGFTRSSSLLIHREVH
ENSSSCP00000025553
C2H2 ZF
77
99
YKCDKCGKGFTRSSSLLIHHSVH
ENSSSCP00000025553
C2H2 ZF
105
127
YKCDKCGKGFTQSSKLHIHQRVH
ENSSSCP00000025553
C2H2 ZF
133
155
YECGECGMSFSQRSNLHIHQRIH
ENSSSCP00000025553
C2H2 ZF
161
183
YKCGECGKGFSQSSNLHIHRCTH
ENSSSCP00000025553
C2H2 ZF
189
211
YQCYECGKGFSQSSDLRIHLRVH
ENSSSCP00000025553
C2H2 ZF
217
239
YHCGKCGKGFSQSSKLLIHQRVH
ENSSSCP00000025553
C2H2 ZF
245
267
YECSKCGKGFSQSSNLHIHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCEY_03457
Ancylostoma ceylanicum
ANCCEY_03457
N
ANCDUO_02619
Ancylostoma duodenale
ANCDUO_02619
N
ANCDUO_12670
Ancylostoma duodenale
ANCDUO_12670
N
BXY_1512700
Bursaphelenchus xylophilus
BXY_1512700
N
DME_0000390001
Dracunculus medinensis
DME_0000390001
N
EEL_0000745801
Elaeophora elaphi
EEL_0000745801
N
HCOI00251100
Haemonchus contortus
HCOI00251100
N
HCOI01543700
Haemonchus contortus
HCOI01543700
N
HPBE_0002664601
Heligmosomoides bakeri
HPBE_0002664601
N
maker-nMf.1.1.scaf00076-augustus-gene-0.21
Meloidogyne floridensis
maker-nMf.1.1.scaf00076-augustus-gene-0.21
N
Minc06478
Meloidogyne incognita
Minc06478
N
NBR_0000271401
Nippostrongylus brasiliensis
NBR_0000271401
N
NBR_0000522801
Nippostrongylus brasiliensis
NBR_0000522801
I
NECAME_19535
Necator americanus
NECAME_19535
N
Ppa-sma-2
Pristionchus pacificus
PPA15247
N
Sakowv30032201m.g
Saccoglossus kowalevskii
Sakowv30032201m.g
I
SMAD1
Ochotona princeps
ENSOPRG00000012775
I
SVE_0161800
Strongyloides venezuelensis
SVE_0161800
N