ENSXMAG00000003301 (Xiphophorus maculatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSXMAG00000003301 T113749_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Klf9
M00777_2.00 		Mus musculus
NCCGTTAN
NTAACGGN		 PBM
Weirauch et al.(2013)
pTH2353 		0.775 0.855
KLF9
M08088_2.00 		Homo sapiens
NVMCACACCCMBN
NVKGGGTGTGKBN		 ChIP-seq
Mathelier et al.(2014)
MA1107.1 		0.775 0.855
KLF9
M08880_2.00 		Homo sapiens
NGCCMCGCCCMCBBS
SVVGKGGGCGKGGCN		 Misc
Kulakovskiy et al.(2013)
KLF9_HUMAN.H11MO.0.C 		0.775 0.855
Klf9
M10345_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BTEB1_01 		0.775 0.855
KLF13
M02903_2.00 		Homo sapiens
DDRMCACGCCCCYTTNDK
MHNAARGGGGCGTGKYHH		 SELEX
Jolma et al.(2013)
KLF13_1 		0.771 0.884
KLF13
M04537_2.00 		Homo sapiens
NRCCACRCCCMCN
NGKGGGYGTGGYN		 SELEX
Yin et al.(2017)
KLF13_eDBD_HT-SELEX 		0.771 0.884
KLF13
M04539_2.00 		Homo sapiens
NRCCACRCCCMYN
NRKGGGYGTGGYN		 SELEX
Yin et al.(2017)
KLF13_FL_HT-SELEX 		0.771 0.884
KLF13
M04538_2.00 		Homo sapiens
NRCCACRCCCMCH
DGKGGGYGTGGYN		 SELEX
Yin et al.(2017)
KLF13_eDBD_Methyl-HT-SELEX 		0.771 0.884
KLF13
M04540_2.00 		Homo sapiens
NRCCACRCCCMCH
DGKGGGYGTGGYN		 SELEX
Yin et al.(2017)
KLF13_FL_Methyl-HT-SELEX 		0.771 0.884
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000003306 C2H2 ZF 134 158
ENSXMAP00000003306 C2H2 ZF 164 188
ENSXMAP00000003306 C2H2 ZF 194 216

Links

Other C2H2 ZF family TFs
Other Xiphophorus maculatus TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00119p00040230 Amborella trichopoda AMTR_s00119p00040230 I
Aquca_027_00052 Aquilegia coerulea Aquca_027_00052 I
ATNAC2 Arabidopsis lyrata fgenesh2_kg.3__1698__AT3G15510.1 I
BGIOSGA002593 Oryza indica BGIOSGA002593 N
BGIOSGA002595 Oryza indica BGIOSGA002595 N
Bostr.28625s0148 Boechera stricta Bostr.28625s0148 I
Bra027237 Brassica rapa Bra027237 I
Carubv10014008m.g Capsella rubella Carubv10014008m.g I
cassava42314.valid.m1 Manihot esculenta cassava42314.valid.m1 I
Ca_19654 Cicer arietinum Ca_19654 I
F775_02328 Aegilops tauschii F775_02328 I
GLYMA13G35560 Glycine max GLYMA13G35560 I
GRMZM2G011598 Zea mays GRMZM2G011598 I
GRMZM2G109627 Zea mays GRMZM2G109627 I
GRMZM2G430849 Zea mays GRMZM2G430849 I
GSMUA_Achr1G08860_001 Musa acuminata GSMUA_Achr1G08860_001 I
GSMUA_Achr3G18010_001 Musa acuminata GSMUA_Achr3G18010_001 I
GSMUA_Achr4G02380_001 Musa acuminata GSMUA_Achr4G02380_001 I
GSMUA_Achr7G21770_001 Musa acuminata GSMUA_Achr7G21770_001 I
GSMUA_Achr9G19520_001 Musa acuminata GSMUA_Achr9G19520_001 I
GSMUA_AchrUn_randomG17360_001 Musa acuminata GSMUA_AchrUn_randomG17360_001 I
LPERR01G00250 Leersia perrieri LPERR01G00250 I
mgf025001m Mimulus guttatus mgf025001m I
NAC056 Arabidopsis thaliana AT3G15510 I
OBART01G00330 Oryza barthii OBART01G00330 N
OBART03G15960 Oryza barthii OBART03G15960 I
OGLUM01G00330 Oryza glumaepatula OGLUM01G00330 N
OGLUM03G16100 Oryza glumaepatula OGLUM03G16100 I
OLONG_005610 Oryza longistaminata OLONG_005610 I
OMERI03G14270 Oryza meridionalis OMERI03G14270 I
ONIVA01G00250 Oryza nivara ONIVA01G00250 N
ONIVA03G16920 Oryza nivara ONIVA03G16920 I
OPUNC01G00300 Oryza punctata OPUNC01G00300 I
OPUNC07G25060 Oryza punctata OPUNC07G25060 I
ORGLA03G0152700 Oryza glaberrima ORGLA03G0152700 I
ORUFI01G00290 Oryza rufipogon ORUFI01G00290 N
ORUFI03G16510 Oryza rufipogon ORUFI03G16510 I
OS03G0327800 Oryza sativa OS03G0327800 I
Pavir.Ea00837 Panicum virgatum Pavir.Ea00837 I
Pavir.J22666 Panicum virgatum Pavir.J22666 I
Pavir.J23256 Panicum virgatum Pavir.J23256 I
Sb01g036560 Sorghum bicolor Sb01g036560 I
Si030267m.g Setaria italica Si030267m.g I
Thhalv10022353m.g Eutrema salsugineum Thhalv10022353m.g I
TRAES3BF020100160CFD_g Triticum aestivum TRAES3BF020100160CFD_g N
Traes_2BS_924D34AA1 Triticum aestivum Traes_2BS_924D34AA1 I
Traes_2BS_C116E5668 Triticum aestivum Traes_2BS_C116E5668 I
VIT_19s0014g03300 Vitis vinifera VIT_19s0014g03300 I