CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GF14523
(
Drosophila ananassae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0091550
T114839_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sna
M03670_2.00
Drosophila melanogaster
TRCACCTGTYVB
VBRACAGGTGYA
SELEX
Nitta et al.(2015)
sna_1
0.813
0.956
sna
M05862_2.00
Drosophila melanogaster
NNVCACCTGTYNN
NNRACAGGTGBNN
SMiLE-seq
Isakova et al.(2017)
Sna
0.813
0.956
sna
M06069_2.00
Drosophila melanogaster
SMACYTGYBN
NVRCARGTKS
B1H
Zhu et al.(2011)
sna_FlyReg_FBgn0003448
0.813
0.956
sna
M06070_2.00
Drosophila melanogaster
SCACCTGWYV
BRWCAGGTGS
B1H
Zhu et al.(2011)
sna_SANGER_10_FBgn0003448
0.813
0.956
sna
M06071_2.00
Drosophila melanogaster
MCACCTGTYVHNNN
NNNDBRACAGGTGK
B1H
Zhu et al.(2011)
sna_SOLEXA_5_FBgn0003448
0.813
0.956
sna
M09664_2.00
Drosophila melanogaster
VMACCTGYB
VRCAGGTKB
Misc
Kulakovskiy et al.(2009)
sna
0.813
0.956
sna
M10375_2.00
Drosophila melanogaster
NKRCACCTGTYNB
VNRACAGGTGYMN
Transfac
Matys et al.(2006)
I$SN_01
0.813
0.956
sna
M10376_2.00
Drosophila melanogaster
WSBHADCAVSTKSK
MSMASBTGHTDVSW
Transfac
Matys et al.(2006)
I$SN_02
0.813
0.956
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0117715
C2H2 ZF
251
273
FKCDQCQKMYSTSMGLSKHQQFH
FBpp0117715
C2H2 ZF
286
308
HSCEECGKLYTTIGALKMHIRTH
FBpp0117715
C2H2 ZF
312
334
CKCPICGKAFSRPWLLQGHIRTH
FBpp0117715
C2H2 ZF
340
362
FECPECPRSFADRSNLRAHQQTH
FBpp0117715
C2H2 ZF
368
389
YACQVCHKSFSRMSLLNKHTSS
Links
Other
C2H2 ZF
family TFs
Other
Drosophila ananassae
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GA17803
Drosophila pseudoobscura
FBgn0077812
I
0.765
GD21953
Drosophila simulans
FBgn0193368
I
0.813
GE19401
Drosophila yakuba
FBgn0236744
I
0.813
GG24206
Drosophila erecta
FBgn0116338
I
0.813
GH13116
Drosophila grimshawi
FBgn0120593
I
0.813
GH22585
Drosophila grimshawi
FBgn0130043
I
0.813
GI22640
Drosophila mojavensis
FBgn0145368
I
0.801
GJ23192
Drosophila virilis
FBgn0210294
I
0.813
GK18251
Drosophila willistoni
FBgn0220250
I
0.812
GL26593
Drosophila persimilis
FBgn0164175
I
0.765
GM14336
Drosophila sechellia
FBgn0169261
I
0.813
LCUP006861
Lucilia cuprina
LCUP006861
I
0.785
MDOA012986
Musca domestica
MDOA012986
I
0.785
sna
Drosophila melanogaster
FBgn0003448
D
0.813