CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GG20347
(
Drosophila erecta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0112538
T115172_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sug
M03688_2.00
Drosophila melanogaster
BVCCCCCCRCVDN
NHBGYGGGGGGBV
SELEX
Nitta et al.(2015)
sug_1
0.827
1.000
sug
M06132_2.00
Drosophila melanogaster
MNKRCCCCCCRSSG
CSSYGGGGGGYMNK
B1H
Zhu et al.(2011)
sug_SANGER_5_FBgn0033782
0.827
1.000
sug
M06133_2.00
Drosophila melanogaster
VVSMCCCCCCRCRRN
NYYGYGGGGGGKSBB
B1H
Zhu et al.(2011)
sug_SOLEXA_5_FBgn0033782
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0138893
C2H2 ZF
126
151
FVCNWTDCDRVFDTLDALAQHVTQRH
FBpp0138893
C2H2 ZF
161
188
YYCRWRGCQRSERGFNARYKMLVHTRTH
FBpp0138893
C2H2 ZF
194
216
HRCHLCEKSFSRAENLKIHIRSH
FBpp0138893
C2H2 ZF
222
246
YKCSFEGCQKAYSNSSDRFKHTRTH
FBpp0138893
C2H2 ZF
252
278
YMCKVAGCQKRYTDPSSLRKHVKTFKH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila erecta
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GA17730
Drosophila pseudoobscura
FBgn0077740
I
0.759
GD10932
Drosophila simulans
FBgn0182695
I
0.827
GE12506
Drosophila yakuba
FBgn0230244
I
0.818
GF12930
Drosophila ananassae
FBgn0089964
I
0.779
GH20305
Drosophila grimshawi
FBgn0127769
I
0.765
GI19975
Drosophila mojavensis
FBgn0142712
I
0.765
GJ21228
Drosophila virilis
FBgn0208361
I
0.765
GK20769
Drosophila willistoni
FBgn0222765
I
0.767
GL17162
Drosophila persimilis
FBgn0154766
I
0.759
GM21434
Drosophila sechellia
FBgn0176315
I
0.781
sug
Drosophila melanogaster
FBgn0033782
D
0.827