CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GH17975
(
Drosophila grimshawi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0125443
T115369_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG4360
M03701_2.00
Drosophila melanogaster
ATTACAACAACAACH
DGTTGTTGTTGTAAT
SELEX
Nitta et al.(2015)
CG4360_1
0.826
0.976
CG4360
M06156_2.00
Drosophila melanogaster
MCAACAACAAVMS
SKBTTGTTGTTGK
B1H
Zhu et al.(2011)
CG4360_F1-3_SANGER_2.5_FBgn0038787
0.826
0.976
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0151881
C2H2 ZF
128
150
KQCHVCKNKFRQLTTLRNHMKIH
FBpp0151881
C2H2 ZF
156
178
YKCKHCDKAFRQISTLTNHVKIH
FBpp0151881
C2H2 ZF
184
206
FTCNICAKDFRQQSTLINHIKTH
FBpp0151881
C2H2 ZF
276
298
YQCSVCKRRFPQLSTLHNHERTH
FBpp0151881
C2H2 ZF
304
326
YKCETCDKSFSQLATLANHKKIH
FBpp0151881
C2H2 ZF
332
354
YTCSYCHMQFRQQSTLTNHMKTH
FBpp0151881
C2H2 ZF
473
495
FGCSVCRRFFSQQSTLVNHIKTH
FBpp0151881
C2H2 ZF
501
523
YKCKICEVSFRQVATLNNHMKIH
FBpp0151881
C2H2 ZF
529
551
YNCSYCPKQFRQKSTLQNHLRVH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila grimshawi
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB000671
Anopheles albimanus
AALB000671
N
AARA008607
Anopheles arabiensis
AARA008607
N
AATE019876
Anopheles atroparvus
AATE019876
N
ACHR008175
Anopheles christyi
ACHR008175
N
ACOM027331
Anopheles coluzzii
ACOM027331
N
ACUA016254
Anopheles culicifacies
ACUA016254
N
ADIR011324
Anopheles dirus
ADIR011324
N
AFAF001738
Anopheles farauti
AFAF001738
N
AFUN000564
Anopheles funestus
AFUN000564
N
AGAP009066
Anopheles gambiae
AGAP009066
N
AMAM014954
Anopheles maculatus
AMAM014954
N
AMEC016629
Anopheles melas
AMEC016629
N
AMEM004408
Anopheles merus
AMEM004408
N
AMIN009611
Anopheles minimus
AMIN009611
N
AQUA004170
Anopheles quadriannulatus
AQUA004170
N
ASIS014530
Anopheles sinensis
ASIS014530
N
ASTEI07215
Anopheles stephensi
ASTEI07215
N