GA24868 (Drosophila pseudoobscura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0246253 T117151_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
seq
M03684_2.00 		Drosophila melanogaster
NDAMCCACCCYTAW
WTARGGGTGGKTHN		 SELEX
Nitta et al.(2015)
seq_1 		0.827 1.000
seq
M03685_2.00 		Drosophila melanogaster
NNWWCAWCCCYTAW
WTARGGGWTGWWNN		 SELEX
Nitta et al.(2015)
seq_2 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0278093 C2H2 ZF 413 440
FBpp0278093 C2H2 ZF 448 471

Links

Other C2H2 ZF family TFs
Other Drosophila pseudoobscura TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSACAG00000003946 Anolis carolinensis ENSACAG00000003946 I
ENSAMEG00000016347 Ailuropoda melanoleuca ENSAMEG00000016347 I
ENSBTAP00000044267-D1 Bos grunniens ENSBTAP00000044267-D1 I
ENSCSAG00000016071 Chlorocebus sabaeus ENSCSAG00000016071 I
ENSDORG00000009268 Dipodomys ordii ENSDORG00000009268 I
ENSGMOG00000002167 Gadus morhua ENSGMOG00000002167 I
ENSMEUG00000010784 Macropus eugenii ENSMEUG00000010784 I
ENSMMUG00000012474 Macaca mulatta ENSMMUG00000012474 I
ENSMPUG00000005961 Mustela putorius furo ENSMPUG00000005961 I
ENSNLEG00000015294 Nomascus leucogenys ENSNLEG00000015294 I
ENSOARG00000019201 Ovis aries ENSOARG00000019201 I
ENSONIG00000006624 Oreochromis niloticus ENSONIG00000006624 I
ENSP00000380073 Macaca fascicularis ENSP00000380073 I
ENSPFOG00000021810 Poecilia formosa ENSPFOG00000021810 I
ENSPPYG00000005686 Pongo abelii ENSPPYG00000005686 I
ENSSHAG00000001872 Sarcophilus harrisii ENSSHAG00000001872 I
ENSSTOG00000023450 Ictidomys tridecemlineatus ENSSTOG00000023450 I
ENSTSYG00000007445 Tarsius syrichta ENSTSYG00000007445 I
ENSXMAG00000004567 Xiphophorus maculatus ENSXMAG00000004567 I
Irf9 Rattus norvegicus ENSRNOG00000019478 I
IRF9 Oryctolagus cuniculus ENSOCUG00000028186 I
IRF9 Pteropus vampyrus ENSPVAG00000007716 I
IRF9 Sus scrofa ENSSSCG00000002002 D
IRF9 Pan troglodytes ENSPTRG00000034494 I
irf9 Tetraodon nigroviridis ENSTNIG00000008698 I
irf9 Takifugu rubripes ENSTRUG00000017722 I
IRF9 Tursiops truncatus ENSTTRG00000008624 I
IRF9 Procavia capensis ENSPCAG00000015500 I
IRF9 Ochotona princeps ENSOPRG00000018909 D
IRF9 Bos taurus ENSBTAG00000005816 I
IRF9 Canis familiaris ENSCAFG00000012007 I
IRF9 Callithrix jacchus ENSCJAG00000007065 I
IRF9 Cavia porcellus ENSCPOG00000026474 I
IRF9 Equus caballus ENSECAG00000024429 I
IRF9 Felis catus ENSFCAG00000018849 I
IRF9 Homo sapiens ENSG00000213928 D
irf9 Gasterosteus aculeatus ENSGACG00000001697 I
IRF9 Gorilla gorilla ENSGGOG00000016046 I
IRF9 Loxodonta africana ENSLAFG00000026182 I
IRF9 Myotis lucifugus ENSMLUG00000025255 I
IRF9 Monodelphis domestica ENSMODG00000003368 I
Irf9 Mus musculus ENSMUSG00000002325 D
IRF9 Otolemur garnettii ENSOGAG00000026670 I
irf9 Oryzias latipes ENSORLG00000013335 I
Myotis_brandtii_IRF9_10003711 Myotis brandtii Myotis_brandtii_IRF9_10003711 I
Ogr03980 Ophisaurus gracilis Ogr03980 I