AtIDD14 (Arabidopsis lyrata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 fgenesh2_kg.2__1036__AT1G68130.1 T117350_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SGR5
M06805_2.00 		Arabidopsis thaliana
WTTTTGTCTTWTHYD
HRDAWAAGACAAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_col_a 		0.803 0.977
SGR5
M06806_2.00 		Arabidopsis thaliana
WTTTGTCTYWWHBNN
NNVDWWRAGACAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_colamp_a 		0.803 0.977
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.2__1036__AT1G68130.1 C2H2 ZF 148 169
fgenesh2_kg.2__1036__AT1G68130.1 C2H2 ZF 169 195

Links

Other C2H2 ZF family TFs
Other Arabidopsis lyrata TFs

142 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA006294 Oryza indica BGIOSGA006294 N
OGLUM02G19970 Oryza glumaepatula OGLUM02G19970 N
OLONG_018125 Oryza longistaminata OLONG_018125 N
ONIVA07G07180 Oryza nivara ONIVA07G07180 N
OPUNC02G17580 Oryza punctata OPUNC02G17580 N
ORGLA02G0169200 Oryza glaberrima ORGLA02G0169200 N
OS02G0542200 Oryza sativa OS02G0542200 N
Si016539m.g Setaria italica Si016539m.g N