CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ORGLA02G0169200
(
Oryza glaberrima
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
ORGLA02G0169200
T179948_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA02G0169200.1
FAR1
53
143
EFYRYYAWKLGFSVRREYANKSRKTGEITSRKFVCSREGFKAPDKRTNHTRTPQPDTRTGCHANLVIRRKNDTSKYEVYAFEAQHNHPLFI
Links
Other
FAR1
family TFs
Other
Oryza glaberrima
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OGLUM02G19970
Oryza glumaepatula
OGLUM02G19970
N
1.000
OLONG_018125
Oryza longistaminata
OLONG_018125
N
1.000
ONIVA07G07180
Oryza nivara
ONIVA07G07180
N
1.000
OS02G0542200
Oryza sativa
OS02G0542200
N
1.000
OB02G27370
Oryza brachyantha
OB02G27370
N
0.967
OPUNC02G17580
Oryza punctata
OPUNC02G17580
N
0.967
BGIOSGA006294
Oryza indica
BGIOSGA006294
N
0.904
Si016539m.g
Setaria italica
Si016539m.g
N
0.711