CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPODL_01443
(
Ogataea parapolymorpha
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
HPODL_01443
T119822_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MET32
M00022_2.00
Saccharomyces cerevisiae
NVMGCCACAV
BTGTGGCKBN
PBM
Badis et al.(2008)
MET32_2153
0.762
0.750
MET32
M01528_2.00
Saccharomyces cerevisiae
MGCCACAN
NTGTGGCK
PBM
Zhu et al.(2009)
Met32
0.762
0.750
MET32
M07452_2.00
Saccharomyces cerevisiae
MGCCACM
KGTGGCK
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0334.1
0.762
0.750
MET32
M08518_2.00
Saccharomyces cerevisiae
VHKCCACA
TGTGGMDB
Misc
DeBoer et al.(2011)
YDR253C_1375
0.762
0.750
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESW97343
C2H2 ZF
236
258
HVCGTCSMTFKRSSDLKRHEKIH
ESW97343
C2H2 ZF
265
285
ICPQCQKGFARKDALKRHIDT
Links
Other
C2H2 ZF
family TFs
Other
Ogataea parapolymorpha
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy