CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPODL_01443
(
Ogataea parapolymorpha
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
HPODL_01443
T119822_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MET32
M00022_2.00
Saccharomyces cerevisiae
NVMGCCACAV
BTGTGGCKBN
PBM
Badis et al.(2008)
MET32_2153
0.762
0.750
MET32
M01528_2.00
Saccharomyces cerevisiae
MGCCACAN
NTGTGGCK
PBM
Zhu et al.(2009)
Met32
0.762
0.750
MET32
M07452_2.00
Saccharomyces cerevisiae
MGCCACM
KGTGGCK
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0334.1
0.762
0.750
MET32
M08518_2.00
Saccharomyces cerevisiae
VHKCCACA
TGTGGMDB
Misc
DeBoer et al.(2011)
YDR253C_1375
0.762
0.750
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESW97343
C2H2 ZF
236
258
HVCGTCSMTFKRSSDLKRHEKIH
ESW97343
C2H2 ZF
265
285
ICPQCQKGFARKDALKRHIDT
Links
Other
C2H2 ZF
family TFs
Other
Ogataea parapolymorpha
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AWRI1499_2615
Brettanomyces bruxellensis
AWRI1499_2615
N
0.789
KUCA_T00005079001
Kuraishia capsulata
KUCA_T00005079001
N
0.781
PAS_chr1-3_0170
Komagataella pastoris
PAS_chr1-3_0170
I
0.780
XP_002489513.1
Pichia pastoris
XP_002489513.1
I
0.780
CLUG_05144
Clavispora lusitaniae
CLUG_05144
N
0.767
CLUG_05144
Candida lusitaniae
CLUG_05144
N
0.767
estExt_fgenesh1_pg.C_chr_4.10541
Pichia stipitis
estExt_fgenesh1_pg.C_chr_4.10541
N
0.766
PICST_67657
Scheffersomyces stipitis
PICST_67657
N
0.766
SKUD_191509
Saccharomyces kudriavzevii
SKUD_191509
I
0.762
MET32
Saccharomyces cerevisiae
YDR253C
D
0.762
4678_YDR253C
Saccharomyces paradoxus
4678_YDR253C
I
0.762
3987_YDR253C
Saccharomyces mikatae
3987_YDR253C
I
0.762
PGUG_01520
Meyerozyma guilliermondii
PGUG_01520
N
0.761
SPAPADRAFT_149927
Spathaspora passalidarum
SPAPADRAFT_149927
N
0.761
GNLVRS01_PISO0L08305g
Millerozyma farinosa
GNLVRS01_PISO0L08305g
N
0.761
CaO19.9326
Candida albicans
CaO19.9326
N
0.761
CaO19.1757
Candida albicans
CaO19.1757
N
0.761
PGUG_01520
Candida guilliermondii
PGUG_01520
N
0.761
CPAG_01593
Candida parapsilosis
CPAG_01593
N
0.761
CD36_24290
Candida dubliniensis
CD36_24290
N
0.761
CORT_0C06530
Candida orthopsilosis
CORT_0C06530
N
0.761
GNLVRS01_PISO0K08304g
Millerozyma farinosa
GNLVRS01_PISO0K08304g
N
0.761
G210_5850
Candida maltosa
G210_5850
N
0.761
CTRG_02010
Candida tropicalis
CTRG_02010
N
0.761
LELG_02390
Lodderomyces elongisporus
LELG_02390
N
0.761