PAS_chr1-3_0170 (Komagataella pastoris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PAS_chr1-3_0170 T125379_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MET32
M00022_2.00 		Saccharomyces cerevisiae
NVMGCCACAV
BTGTGGCKBN		 PBM
Badis et al.(2008)
MET32_2153 		0.758 0.750
MET32
M01528_2.00 		Saccharomyces cerevisiae
MGCCACAN
NTGTGGCK		 PBM
Zhu et al.(2009)
Met32 		0.758 0.750
MET32
M07452_2.00 		Saccharomyces cerevisiae
MGCCACM
KGTGGCK		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0334.1 		0.758 0.750
MET32
M08518_2.00 		Saccharomyces cerevisiae
VHKCCACA
TGTGGMDB		 Misc
DeBoer et al.(2011)
YDR253C_1375 		0.758 0.750
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAY67232 C2H2 ZF 217 239
CAY67232 C2H2 ZF 246 266

Links

Other C2H2 ZF family TFs
Other Komagataella pastoris TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
XP_002489513.1 Pichia pastoris XP_002489513.1 I 0.827
HPODL_01443 Ogataea parapolymorpha HPODL_01443 I 0.780
CLUG_05144 Candida lusitaniae CLUG_05144 N 0.771
CLUG_05144 Clavispora lusitaniae CLUG_05144 N 0.771
CPAG_01593 Candida parapsilosis CPAG_01593 N 0.766
AWRI1499_2615 Brettanomyces bruxellensis AWRI1499_2615 N 0.766
CaO19.1757 Candida albicans CaO19.1757 N 0.766
CaO19.9326 Candida albicans CaO19.9326 N 0.766
CD36_24290 Candida dubliniensis CD36_24290 N 0.766
CORT_0C06530 Candida orthopsilosis CORT_0C06530 N 0.766
CTRG_02010 Candida tropicalis CTRG_02010 N 0.766
G210_5850 Candida maltosa G210_5850 N 0.766
GNLVRS01_PISO0K08304g Millerozyma farinosa GNLVRS01_PISO0K08304g N 0.766
GNLVRS01_PISO0L08305g Millerozyma farinosa GNLVRS01_PISO0L08305g N 0.766
LELG_02390 Lodderomyces elongisporus LELG_02390 N 0.766
PICST_67657 Scheffersomyces stipitis PICST_67657 N 0.766
SPAPADRAFT_149927 Spathaspora passalidarum SPAPADRAFT_149927 N 0.766
estExt_fgenesh1_pg.C_chr_4.10541 Pichia stipitis estExt_fgenesh1_pg.C_chr_4.10541 N 0.766
DEHA2F09394g Debaryomyces hansenii DEHA2F09394g N 0.762
PGUG_01520 Candida guilliermondii PGUG_01520 N 0.760
PGUG_01520 Meyerozyma guilliermondii PGUG_01520 N 0.760
NCAS_0C02430 Naumovozyma castellii NCAS_0C02430 I 0.758
SKUD_191509 Saccharomyces kudriavzevii SKUD_191509 I 0.758
MET32 Saccharomyces cerevisiae YDR253C D 0.758
Scas_Contig568.5 Saccharomyces castellii Scas_Contig568.5 I 0.758
3987_YDR253C Saccharomyces mikatae 3987_YDR253C I 0.758
4678_YDR253C Saccharomyces paradoxus 4678_YDR253C I 0.758
CANTEDRAFT_115633 Candida tenuis CANTEDRAFT_115633 N 0.756