CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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JAAARDRAFT_112445
(
Jaapia argillacea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
JAAARDRAFT_112445
T120152_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_258883
M01464_2.00
Schizophyllum commune
NNCCCCTDD
HHAGGGGNN
PBM
Najafabadi et al.(2015a)
pTH10244
0.768
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KDQ62935
C2H2 ZF
35
60
YMCSVKDCGKCFARGEHLKRHVRSIH
KDQ62935
C2H2 ZF
66
90
HRCPYPGCGKDFSRHDNLGQHMRVH
Links
Other
C2H2 ZF
family TFs
Other
Jaapia argillacea
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIS002444
Anopheles sinensis
ASIS002444
N
0.000
GH16346
Drosophila grimshawi
FBgn0123817
N
0.000
LLOJ002427
Lutzomyia longipalpis
LLOJ002427
N
0.000
LLOJ003838
Lutzomyia longipalpis
LLOJ003838
N
0.000
RSKR_0001081900
Rhabditophanes kr3021
RSKR_0001081900
N
0.000