CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RSKR_0001081900
(
Rhabditophanes kr3021
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
RSKR_0001081900
T336880_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RSKR_0001081900.1
Sox
46
114
VKRPMNAFMIWSKEQRKILSLQNPGIHNSELSKLLGIKWKLMNEQDKFPYVIESKKLRDIHYVKYPDYK
RSKR_0001081900.1
Sox
227
295
VKRPMNAFMIWSKEQRKILSLQNPGIHNSELSKLLGIKWKLMNEQDKFPYVIESKKLRDIHYVKYPDYK
Links
Other
Sox
family TFs
Other
Rhabditophanes kr3021
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LLOJ002427
Lutzomyia longipalpis
LLOJ002427
N
0.490
LLOJ009706
Lutzomyia longipalpis
LLOJ009706
N
0.442
CBG07191
Caenorhabditis briggsae
CBG07191
N
0.426