LotgiG155751 (Lottia gigantea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 LotgiG155751 T121688_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gl
M03671_2.00 		Drosophila melanogaster
RTTACCATACAAGTGCAV
BTGCACTTGTATGGTAAY		 SELEX
Nitta et al.(2015)
gl_1 		0.794 0.895
gl
M06078_2.00 		Drosophila melanogaster
DAYNCWTBAAAT
ATTTVAWGNRTH		 B1H
Zhu et al.(2011)
gl_FlyReg_FBgn0004618 		0.794 0.895
gl
M06079_2.00 		Drosophila melanogaster
TTRTABGGYTTC
GAARCCVTAYAA		 B1H
Zhu et al.(2011)
gl_SANGER_5_FBgn0004618 		0.794 0.895
gl
M06080_2.00 		Drosophila melanogaster
NNBDWNTADGGCTTC
GAAGCCHTANWHVNN		 B1H
Zhu et al.(2011)
gl_SOLEXA_5_FBgn0004618 		0.794 0.895
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP155751 C2H2 ZF 5 26
LotgiP155751 C2H2 ZF 32 54
LotgiP155751 C2H2 ZF 60 82
LotgiP155751 C2H2 ZF 88 110
LotgiP155751 C2H2 ZF 116 138

Links

Other C2H2 ZF family TFs
Other Lottia gigantea TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT2G15740 Arabidopsis thaliana AT2G15740 D
AT2G18490 Arabidopsis thaliana AT2G18490 I
AT5G42640 Arabidopsis thaliana AT5G42640 I
Bo7g010020 Brassica oleracea Bo7g010020 I
Bo9g147060 Brassica oleracea Bo9g147060 I
Bostr.10199s0147 Boechera stricta Bostr.10199s0147 I
Bostr.18351s0050 Boechera stricta Bostr.18351s0050 I
Bra039606 Brassica rapa Bra039606 I
Cagra.0604s0001 Capsella grandiflora Cagra.0604s0001 I
Cagra.2968s0004 Capsella grandiflora Cagra.2968s0004 I
Cagra.3954s0034 Capsella grandiflora Cagra.3954s0034 I
Cagra.6034s0007 Capsella grandiflora Cagra.6034s0007 I
Carubv10002800m.g Capsella rubella Carubv10002800m.g I
Carubv10015674m.g Capsella rubella Carubv10015674m.g I
Carubv10015875m.g Capsella rubella Carubv10015875m.g I
Carubv10016477m.g Capsella rubella Carubv10016477m.g I
Carubv10025077m.g Capsella rubella Carubv10025077m.g I
Carubv10027554m.g Capsella rubella Carubv10027554m.g I
scaffold_303767.1 Arabidopsis lyrata scaffold_303767.1 I
scaffold_602360.1 Arabidopsis lyrata scaffold_602360.1 I
Thhalv10015522m.g Eutrema salsugineum Thhalv10015522m.g I
Thhalv10023174m.g Eutrema salsugineum Thhalv10023174m.g I