CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI02G19990
(
Oryza meridionalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
OMERI02G19990
T124883_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI02G19990.1
C2H2 ZF
64
88
FLCSYEGCGKTFVDAGALRKHAHVH
OMERI02G19990.1
C2H2 ZF
93
117
YVCHYAGCDKKFLDSSKLKRHFLIH
OMERI02G19990.1
C2H2 ZF
123
147
FVCPHEGCGKAFSLDFNLKAHMKTH
OMERI02G19990.1
C2H2 ZF
153
178
HVCKYPECARRFTQESKLRAHIKQQH
OMERI02G19990.1
C2H2 ZF
221
246
YVCPYDGCAKAYIHEYKLNLHLKKEH
Links
Other
C2H2 ZF
family TFs
Other
Oryza meridionalis
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA018950
Oryza indica
BGIOSGA018950
N
GRMZM2G089662
Zea mays
GRMZM2G089662
N
Pavir.Ca00617
Panicum virgatum
Pavir.Ca00617
N
Pavir.J13190
Panicum virgatum
Pavir.J13190
N
Sb09g001150
Sorghum bicolor
Sb09g001150
N
Si024218m.g
Setaria italica
Si024218m.g
N