ORUFI02G19290 (Oryza rufipogon)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ORUFI02G19290 T125140_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
JKD
M06818_2.00 		Arabidopsis thaliana
HHNWWTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAWWNDD		 Dap-seq
OMalley et al.(2016)
JKD_col_a 		0.782 0.878
id1
M02672_2.00 		Zea mays
TBKYYBYTHBYG
CRVDARVRRMVA		 SELEX
Mathelier et al.(2014)
MA0120.1 		0.768 0.756
id1
M10380_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ID1_01 		0.768 0.756
IDD1
M06824_2.00 		Arabidopsis thaliana
DNTTTTGTCKTTTWBYD
HRVWAAAMGACAAAANH		 Dap-seq
OMalley et al.(2016)
At5g66730_colamp_a 		0.762 0.878
IDD1
M06825_2.00 		Arabidopsis thaliana
WDTTTTGTCKTTTWNYD
HRNWAAAMGACAAAAHW		 Dap-seq
OMalley et al.(2016)
At5g66730_col 		0.762 0.878
AT1G14580
M06797_2.00 		Arabidopsis thaliana
NNNWWTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAWWNNN		 Dap-seq
OMalley et al.(2016)
At1g14580_col_a 		0.758 0.854
AT1G14580
M06798_2.00 		Arabidopsis thaliana
NNTTTTGTCKTTTWSYD
HRSWAAAMGACAAAANN		 Dap-seq
OMalley et al.(2016)
At1g14580_colamp_a 		0.758 0.854
IDD5
M06807_2.00 		Arabidopsis thaliana
DNTTTTGTCKTTTTSYD
HRSAAAAMGACAAAANH		 Dap-seq
OMalley et al.(2016)
IDD5_colamp_a 		0.758 0.854
IDD5
M06808_2.00 		Arabidopsis thaliana
WTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAW		 Dap-seq
OMalley et al.(2016)
IDD5_col 		0.758 0.854
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI02G19290.1 C2H2 ZF 142 163
ORUFI02G19290.1 C2H2 ZF 164 188

Links

Other C2H2 ZF family TFs
Other Oryza rufipogon TFs

488 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29842.m003592 Ricinus communis 29842.m003592 N
30086.m000210 Ricinus communis 30086.m000210 N
30169.m006531 Ricinus communis 30169.m006531 N
AMTR_s00057p00119300 Amborella trichopoda AMTR_s00057p00119300 N
AMTR_s00147p00088570 Amborella trichopoda AMTR_s00147p00088570 N
Aquca_012_00145 Aquilegia coerulea Aquca_012_00145 N
cassava11157.m1 Manihot esculenta cassava11157.m1 N
cassava23225.valid.m1 Manihot esculenta cassava23225.valid.m1 N
cassava23226.valid.m1 Manihot esculenta cassava23226.valid.m1 N
cassava24285.valid.m1 Manihot esculenta cassava24285.valid.m1 N
cassava24286.valid.m1 Manihot esculenta cassava24286.valid.m1 N
cassava4691.m1 Manihot esculenta cassava4691.m1 N
Ciclev10017220m.g Citrus clementina Ciclev10017220m.g N
Eucgr.A01720 Eucalyptus grandis Eucgr.A01720 N
Eucgr.D01323 Eucalyptus grandis Eucgr.D01323 N
Eucgr.K00803 Eucalyptus grandis Eucgr.K00803 N
evm.TU.contig_29502 Carica papaya evm.TU.contig_29502 N
gene23919-v1.0-hybrid Fragaria vesca gene23919-v1.0-hybrid N
GLYMA06G45941 Glycine max GLYMA06G45941 N
GLYMA12G10790 Glycine max GLYMA12G10790 N
GLYMA12G32130 Glycine max GLYMA12G32130 N
Gorai.002G083400 Gossypium raimondii Gorai.002G083400 N
Gorai.008G172400 Gossypium raimondii Gorai.008G172400 N
Gorai.010G252300 Gossypium raimondii Gorai.010G252300 N
Gorai.010G253000 Gossypium raimondii Gorai.010G253000 N
GSMUA_Achr10G09220_001 Musa acuminata GSMUA_Achr10G09220_001 N
Lus10007643.g Linum usitatissimum Lus10007643.g N
Lus10018366.g Linum usitatissimum Lus10018366.g N
Lus10018414.g Linum usitatissimum Lus10018414.g N
MDP0000216918 Malus domestica MDP0000216918 N
MDP0000270078 Malus domestica MDP0000270078 N
MDP0000387366 Malus domestica MDP0000387366 N
MDP0000499190 Malus domestica MDP0000499190 N
mgf009009m Mimulus guttatus mgf009009m N
MTR_4g046737 Medicago truncatula MTR_4g046737 N
PDK_20s1307674g001 Phoenix dactylifera PDK_20s1307674g001 N
PDK_20s1335581g001 Phoenix dactylifera PDK_20s1335581g001 N
PK11198.1 Cannabis sativa PK11198.1 N
Pm009748 Prunus mume Pm009748 N
POPTR_0004s02060 Populus trichocarpa POPTR_0004s02060 N
POPTR_0007s02510 Populus trichocarpa POPTR_0007s02510 N
POPTR_0011s00390 Populus trichocarpa POPTR_0011s00390 N
POPTR_0012s01420 Populus trichocarpa POPTR_0012s01420 N
POPTR_0015s02310 Populus trichocarpa POPTR_0015s02310 N
POPTR_0017s06470 Populus trichocarpa POPTR_0017s06470 N
PRUPE_ppa014728mg Prunus persica PRUPE_ppa014728mg N
PRUPE_ppa023926mg Prunus persica PRUPE_ppa023926mg N
SapurV1A.0345s0340 Salix purpurea SapurV1A.0345s0340 N
SapurV1A.0346s0010 Salix purpurea SapurV1A.0346s0010 N
SapurV1A.0377s0050 Salix purpurea SapurV1A.0377s0050 N
SapurV1A.0722s0160 Salix purpurea SapurV1A.0722s0160 N
SapurV1A.0779s0100 Salix purpurea SapurV1A.0779s0100 N
SapurV1A.0928s0060 Salix purpurea SapurV1A.0928s0060 N
SapurV1A.1106s0040 Salix purpurea SapurV1A.1106s0040 N
SapurV1A.1227s0050 Salix purpurea SapurV1A.1227s0050 N
Solyc07g052490.2 Solanum lycopersicum Solyc07g052490.2 N
TCM_011327 Theobroma cacao TCM_011327 N
TCM_015351 Theobroma cacao TCM_015351 N
TCM_030163 Theobroma cacao TCM_030163 N
TCM_046858 Theobroma cacao TCM_046858 N
VIT_10s0116g00500 Vitis vinifera VIT_10s0116g00500 N
VIT_12s0059g02360 Vitis vinifera VIT_12s0059g02360 N