OS08G0467100 (Oryza sativa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OS08G0467100 T125240_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SGR5
M06805_2.00 		Arabidopsis thaliana
WTTTTGTCTTWTHYD
HRDAWAAGACAAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_col_a 		0.759 0.905
SGR5
M06806_2.00 		Arabidopsis thaliana
WTTTGTCTYWWHBNN
NNVDWWRAGACAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_colamp_a 		0.759 0.905
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS08T0467100-01 C2H2 ZF 143 164
OS08T0467100-01 C2H2 ZF 164 189
OS08T0467100-02 C2H2 ZF 143 164
OS08T0467100-02 C2H2 ZF 164 189

Links

Other C2H2 ZF family TFs
Other Oryza sativa TFs

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00089p00043950 Amborella trichopoda AMTR_s00089p00043950 N 0.000
BGIOSGA012015 Oryza indica BGIOSGA012015 N 0.000
evm.TU.supercontig_55.64 Carica papaya evm.TU.supercontig_55.64 N 0.000
gene16221-v1.0-hybrid Fragaria vesca gene16221-v1.0-hybrid N 0.000
GSMUA_Achr10G30300_001 Musa acuminata GSMUA_Achr10G30300_001 N 0.000
GSMUA_Achr11G02740_001 Musa acuminata GSMUA_Achr11G02740_001 N 0.000
GSMUA_Achr3G06660_001 Musa acuminata GSMUA_Achr3G06660_001 N 0.000
GSMUA_Achr6G10290_001 Musa acuminata GSMUA_Achr6G10290_001 N 0.000
GSMUA_Achr7G12790_001 Musa acuminata GSMUA_Achr7G12790_001 N 0.000
GSMUA_Achr8G12330_001 Musa acuminata GSMUA_Achr8G12330_001 N 0.000
LPERR03G05820 Leersia perrieri LPERR03G05820 N 0.000
Lus10001271.g Linum usitatissimum Lus10001271.g N 0.000
Lus10009475.g Linum usitatissimum Lus10009475.g N 0.000
MLOC_67417 Hordeum vulgare MLOC_67417 N 0.000
OBART03G06470 Oryza barthii OBART03G06470 N 0.000
OGLUM03G06480 Oryza glumaepatula OGLUM03G06480 N 0.000
OLONG_001045 Oryza longistaminata OLONG_001045 N 0.000
OMERI03G06350 Oryza meridionalis OMERI03G06350 N 0.000
ONIVA02G06380 Oryza nivara ONIVA02G06380 N 0.000
ORGLA03G0062600 Oryza glaberrima ORGLA03G0062600 N 0.000
ORUFI03G06370 Oryza rufipogon ORUFI03G06370 N 0.000
OS03G0188400 Oryza sativa OS03G0188400 N 0.000
POPTR_0002s18100 Populus trichocarpa POPTR_0002s18100 N 0.000
POPTR_0014s10190 Populus trichocarpa POPTR_0014s10190 N 0.000
SapurV1A.0003s0430 Salix purpurea SapurV1A.0003s0430 N 0.000
SapurV1A.0151s0200 Salix purpurea SapurV1A.0151s0200 N 0.000
SapurV1A.0162s0340 Salix purpurea SapurV1A.0162s0340 N 0.000
Si013925m.g Setaria italica Si013925m.g N 0.000
TRIUR3_09788 Triticum urartu TRIUR3_09788 N 0.000
VIT_07s0191g00240 Vitis vinifera VIT_07s0191g00240 N 0.000