CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SU7_0544
(
Saccharomyces arboricola
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SU7_0544
T129860_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
STP4
M00018_2.00
Saccharomyces cerevisiae
NNNKSTRDN
NHYASMNNN
PBM
Badis et al.(2008)
STP4_2135
0.815
0.957
STP4
M01526_2.00
Saccharomyces cerevisiae
TRCGGCKB
VMGCCGYA
PBM
Zhu et al.(2009)
Stp4
0.815
0.957
STP4
M07448_2.00
Saccharomyces cerevisiae
NGCGCTABH
DVTAGCGCN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0397.1
0.815
0.957
STP3
M00034_2.00
Saccharomyces cerevisiae
NTAGCGBD
HVCGCTAN
PBM
Badis et al.(2008)
STP3_4483
0.776
0.870
STP3
M07464_2.00
Saccharomyces cerevisiae
DNTAGCGBN
NVCGCTANH
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0396.1
0.776
0.870
STP3
M08535_2.00
Saccharomyces cerevisiae
DNTAGCGBN
NVCGCTANH
Misc
DeBoer et al.(2011)
YLR375W_568
0.776
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EJS44388
C2H2 ZF
304
326
HKCPVCQRGFARNNDLIRHKKRH
Links
Other
C2H2 ZF
family TFs
Other
Saccharomyces arboricola
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_2AS_731C703DE
Triticum aestivum
Traes_2AS_731C703DE
I
Traes_2BS_E1E541767
Triticum aestivum
Traes_2BS_E1E541767
I
Traes_2DS_3569AEDFB
Triticum aestivum
Traes_2DS_3569AEDFB
I
Traes_4BL_F49830790
Triticum aestivum
Traes_4BL_F49830790
N
Traes_4DL_FD6DBA41D
Triticum aestivum
Traes_4DL_FD6DBA41D
N