YQE_05719 (Dendroctonus ponderosae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 YQE_05719 T131934_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sob
M03674_2.00 		Drosophila melanogaster
RCTACYGNRTTACGCV
BGCGTAAYNCRGTAGY		 SELEX
Nitta et al.(2015)
sob_1 		0.821 0.965
sob
M03675_2.00 		Drosophila melanogaster
NGCGTAABNSNRGTAGY
RCTACYNSNVTTACGCN		 SELEX
Nitta et al.(2015)
sob_2 		0.821 0.965
sob
M06088_2.00 		Drosophila melanogaster
GCTWCTGBDNBDV
BHVNHVCAGWAGC		 B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892 		0.821 0.965
sob
M06089_2.00 		Drosophila melanogaster
BDGCTACYGKDBNN
NNVHMCRGTAGCHV		 B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892 		0.821 0.965
bowl
M03676_2.00 		Drosophila melanogaster
GCGTAABACNRGKAGYN
NRCTMCYNGTVTTACGC		 SELEX
Nitta et al.(2015)
bowl_1 		0.813 0.965
bowl
M03677_2.00 		Drosophila melanogaster
NGCTACYGTRTTACGCN
NGCGTAAYACRGTAGCN		 SELEX
Nitta et al.(2015)
bowl_2 		0.813 0.965
bowl
M06090_2.00 		Drosophila melanogaster
RCTWCYGK
MCRGWAGY		 B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893 		0.813 0.965
OSR2
M04521_2.00 		Homo sapiens
NGCTACYGBD
HVCRGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX 		0.797 0.904
OSR2
M08324_2.00 		Homo sapiens
NBDGCTNCTGN
NCAGNAGCHVN		 ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME 		0.797 0.904
OSR2
M08908_2.00 		Homo sapiens
NBHNYWGCTNCTSHDB
VHDSAGNAGCWRNDVN		 Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C 		0.797 0.904
OSR2
M04522_2.00 		Homo sapiens
NGCTACTGND
HNCAGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX 		0.797 0.904
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENN77836 C2H2 ZF 265 287
ENN77836 C2H2 ZF 293 315
ENN77836 C2H2 ZF 321 343
ENN77836 C2H2 ZF 349 371
ENN77836 C2H2 ZF 377 399

Links

Other C2H2 ZF family TFs
Other Dendroctonus ponderosae TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCSAG00000006974 Chlorocebus sabaeus ENSCSAG00000006974 I
ENSDNOG00000049583 Dasypus novemcinctus ENSDNOG00000049583 I
ENSMPUG00000004860 Mustela putorius furo ENSMPUG00000004860 I
ENSNLEG00000010502 Nomascus leucogenys ENSNLEG00000010502 I
ENSOARG00000008348 Ovis aries ENSOARG00000008348 I
ENSP00000378882 Macaca fascicularis ENSP00000378882 I
ENSP00000378882-D1 Bos grunniens ENSP00000378882-D1 I
ENSPANG00000025098 Papio anubis ENSPANG00000025098 I
ENSPPYG00000019350 Pongo abelii ENSPPYG00000019350 I
ENSPTRG00000021118 Pan troglodytes ENSPTRG00000021118 I
ENSTSYG00000009571 Tarsius syrichta ENSTSYG00000009571 I
ZNF484 Gorilla gorilla ENSGGOG00000014338 I
ZNF484 Macaca mulatta ENSMMUG00000002396 I
ZNF484 Homo sapiens ENSG00000127081 D
ZNF484 Callithrix jacchus ENSCJAG00000005536 I
ZNF484 Tupaia belangeri ENSTBEG00000005945 N
ZNF484 Bos taurus ENSBTAG00000031682 I
ZNF585A Canis familiaris ENSCAFG00000029327 I