YQE_05719 (Dendroctonus ponderosae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 YQE_05719 T131934_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sob
M03674_2.00 		Drosophila melanogaster
RCTACYGNRTTACGCV
BGCGTAAYNCRGTAGY		 SELEX
Nitta et al.(2015)
sob_1 		0.821 0.965
sob
M03675_2.00 		Drosophila melanogaster
NGCGTAABNSNRGTAGY
RCTACYNSNVTTACGCN		 SELEX
Nitta et al.(2015)
sob_2 		0.821 0.965
sob
M06088_2.00 		Drosophila melanogaster
GCTWCTGBDNBDV
BHVNHVCAGWAGC		 B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892 		0.821 0.965
sob
M06089_2.00 		Drosophila melanogaster
BDGCTACYGKDBNN
NNVHMCRGTAGCHV		 B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892 		0.821 0.965
bowl
M03676_2.00 		Drosophila melanogaster
GCGTAABACNRGKAGYN
NRCTMCYNGTVTTACGC		 SELEX
Nitta et al.(2015)
bowl_1 		0.813 0.965
bowl
M03677_2.00 		Drosophila melanogaster
NGCTACYGTRTTACGCN
NGCGTAAYACRGTAGCN		 SELEX
Nitta et al.(2015)
bowl_2 		0.813 0.965
bowl
M06090_2.00 		Drosophila melanogaster
RCTWCYGK
MCRGWAGY		 B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893 		0.813 0.965
OSR2
M04521_2.00 		Homo sapiens
NGCTACYGBD
HVCRGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX 		0.797 0.904
OSR2
M08324_2.00 		Homo sapiens
NBDGCTNCTGN
NCAGNAGCHVN		 ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME 		0.797 0.904
OSR2
M08908_2.00 		Homo sapiens
NBHNYWGCTNCTSHDB
VHDSAGNAGCWRNDVN		 Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C 		0.797 0.904
OSR2
M04522_2.00 		Homo sapiens
NGCTACTGND
HNCAGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX 		0.797 0.904
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENN77836 C2H2 ZF 265 287
ENN77836 C2H2 ZF 293 315
ENN77836 C2H2 ZF 321 343
ENN77836 C2H2 ZF 349 371
ENN77836 C2H2 ZF 377 399

Links

Other C2H2 ZF family TFs
Other Dendroctonus ponderosae TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TC005788 Tribolium castaneum TC005788 I 0.825
GF14663 Drosophila ananassae FBgn0091690 I 0.823
GH13192 Drosophila grimshawi FBgn0120669 I 0.823
LCUP002077 Lucilia cuprina LCUP002077 I 0.823
MDOA011451 Musca domestica MDOA011451 I 0.823
sob Drosophila melanogaster FBgn0004892 D 0.821
GG24427 Drosophila erecta FBgn0116559 I 0.821
GI17769 Drosophila mojavensis FBgn0140510 I 0.821
GL19470 Drosophila persimilis FBgn0157069 I 0.821
GM18136 Drosophila sechellia FBgn0173043 I 0.821
GJ17594 Drosophila virilis FBgn0204764 I 0.821
GK15478 Drosophila willistoni FBgn0217483 I 0.821
GE14841 Drosophila yakuba FBgn0232433 I 0.821
GA25976 Drosophila pseudoobscura FBgn0247353 I 0.821
KGM_20290 Danaus plexippus KGM_20290 I 0.821
MCINX006060 Melitaea cinxia MCINX006060 I 0.821
ACYPI007518 Acyrthosiphon pisum ACYPI007518 I 0.819
GD22744 Drosophila simulans FBgn0194140 I 0.818
L798_02529 Zootermopsis nevadensis L798_02529 I 0.816
ODR1 Anopheles gambiae AGAP007973 I 0.814
NV12189 Nasonia vitripennis NV12189 I 0.814
AATE001257 Anopheles atroparvus AATE001257 I 0.814
ACOM030727 Anopheles coluzzii ACOM030727 I 0.814
AEPI004813 Anopheles epiroticus AEPI004813 I 0.814
AFAF004720 Anopheles farauti AFAF004720 I 0.814
AFUN006320 Anopheles funestus AFUN006320 I 0.814
AMEC005957 Anopheles melas AMEC005957 I 0.814
AMEM017192 Anopheles merus AMEM017192 I 0.814
AMIN006295 Anopheles minimus AMIN006295 I 0.814
ASTEI01738 Anopheles stephensi ASTEI01738 I 0.814
bowl Drosophila melanogaster FBgn0004893 D 0.813
GA10014 Drosophila pseudoobscura FBgn0070073 I 0.813
GF15254 Drosophila ananassae FBgn0092279 I 0.813
GG24967 Drosophila erecta FBgn0117096 I 0.813
GH13710 Drosophila grimshawi FBgn0121186 I 0.813
GI23940 Drosophila mojavensis FBgn0146665 I 0.813
GL18676 Drosophila persimilis FBgn0156277 I 0.813
GM18435 Drosophila sechellia FBgn0173342 I 0.813
GD23254 Drosophila simulans FBgn0194642 I 0.813
GJ21213 Drosophila virilis FBgn0208346 I 0.813
GK14650 Drosophila willistoni FBgn0216656 I 0.813
GE18258 Drosophila yakuba FBgn0235686 I 0.813
CpipJ_CPIJ010652 Culex pipiens CpipJ_CPIJ010652 I 0.811
AAEL007453 Aedes aegypti AAEL007453 I 0.811
AAEL008961 Aedes aegypti AAEL008961 I 0.811
ACEP20581 Atta cephalotes ACEP20581 I 0.811
ODR2 Anopheles gambiae AGAP008222 I 0.811
CPIJ010652 Culex quinquefasciatus CPIJ010652 I 0.811
DAPPUDRAFT_238529 Daphnia pulex DAPPUDRAFT_238529 I 0.811
GB49901 Apis mellifera GB49901 I 0.811
GB49914 Apis mellifera GB49914 I 0.811
L798_02536 Zootermopsis nevadensis L798_02536 I 0.811
NV12185 Nasonia vitripennis NV12185 I 0.811
PHUM445550 Pediculus humanus PHUM445550 I 0.811
SINV17987 Solenopsis invicta SINV17987 I 0.811
SINV18115 Solenopsis invicta SINV18115 I 0.811
TC005784 Tribolium castaneum TC005784 I 0.811
Cflo_02191--XP_393879.3_APIME Camponotus floridanus Cflo_02191--XP_393879.3_APIME I 0.811
LCUP002070 Lucilia cuprina LCUP002070 I 0.811
MDOA005526 Musca domestica MDOA005526 I 0.811
ACYPI008391 Acyrthosiphon pisum ACYPI008391 I 0.809
PHUM125080 Pediculus humanus PHUM125080 I 0.809
ENSFALG00000005731 Ficedula albicollis ENSFALG00000005731 I 0.807
ENSGALG00000016016 Gallus gallus ENSGALG00000016016 I 0.807
ENSSHAG00000007793 Sarcophilus harrisii ENSSHAG00000007793 I 0.807
SMAR005255 Strigamia maritima SMAR005255 I 0.807
ADAC005347 Anopheles darlingi ADAC005347 I 0.806
DAPPUDRAFT_347540 Daphnia pulex DAPPUDRAFT_347540 I 0.805
Sakowv30016612m.g Saccoglossus kowalevskii Sakowv30016612m.g I 0.804
ACEP20577 Atta cephalotes ACEP20577 I 0.803
ADAC010373 Anopheles darlingi ADAC010373 I 0.803
estExt_fgenesh2_pg.C_1600105 Branchiostoma floridae estExt_fgenesh2_pg.C_1600105 I 0.803
estExt_fgenesh2_pg.C_1600113 Branchiostoma floridae estExt_fgenesh2_pg.C_1600113 I 0.803
fgenesh2_pg.scaffold_160000107 Branchiostoma floridae fgenesh2_pg.scaffold_160000107 I 0.803
fgenesh2_pg.scaffold_160000114 Branchiostoma floridae fgenesh2_pg.scaffold_160000114 I 0.803
ISCW005884 Ixodes scapularis ISCW005884 I 0.801
ISCW017921 Ixodes scapularis ISCW017921 I 0.801
Cflo_02188--XP_001120905.1_APIME Camponotus floridanus Cflo_02188--XP_001120905.1_APIME I 0.801
ENSAMEG00000000519 Ailuropoda melanoleuca ENSAMEG00000000519 I 0.797
OSR2 Canis familiaris ENSCAFG00000000493 I 0.797
OSR2 Callithrix jacchus ENSCJAG00000015627 I 0.797
Osr2 Dipodomys ordii ENSDORG00000011823 I 0.797
OSR2 Equus caballus ENSECAG00000017784 I 0.797
OSR2 Erinaceus europaeus ENSEEUG00000008304 I 0.797
OSR2 Homo sapiens ENSG00000164920 D 0.797
OSR2 Gorilla gorilla ENSGGOG00000006716 I 0.797
OSR2 Microcebus murinus ENSMICG00000004390 I 0.797
OSR2 Macaca mulatta ENSMMUG00000022185 I 0.797
ENSNLEG00000002725 Nomascus leucogenys ENSNLEG00000002725 I 0.797
ENSOARG00000002902 Ovis aries ENSOARG00000002902 I 0.797
OSR2 Otolemur garnettii ENSOGAG00000007928 I 0.797
ENSONIG00000006859 Oreochromis niloticus ENSONIG00000006859 I 0.797
OSR2 Ochotona princeps ENSOPRG00000005325 I 0.797
osr2 Oryzias latipes ENSORLG00000002797 I 0.797
OSR2 Procavia capensis ENSPCAG00000003419 I 0.797
ENSPPYG00000018781 Pongo abelii ENSPPYG00000018781 I 0.797
OSR2 Pan troglodytes ENSPTRG00000020463 I 0.797
OSR2 Pteropus vampyrus ENSPVAG00000004363 I 0.797
osr2 Takifugu rubripes ENSTRUG00000011070 I 0.797
ENSTSYG00000013426 Tarsius syrichta ENSTSYG00000013426 I 0.797
OSR2 Tursiops truncatus ENSTTRG00000007477 I 0.797
PHUM125070 Pediculus humanus PHUM125070 I 0.797
ENSMMUP00000029201 Macaca fascicularis ENSMMUP00000029201 I 0.797
XP_002934454 Xenopus tropicalis XP_002934454 I 0.797
tetur09g03230 Tetranychus urticae tetur09g03230 I 0.796
SMAR002904 Strigamia maritima SMAR002904 I 0.795
SPU_024877 Strongylocentrotus purpuratus SPU_024877 I 0.794
EFV49300 Trichinella spiralis EFV49300 I 0.760
D917_03163 Trichinella nativa D917_03163 I 0.760
D917_07818 Trichinella nativa D917_07818 I 0.760
ENSCING00000021903 Ciona intestinalis ENSCING00000021903 I 0.758