CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACEP20577
(
Atta cephalotes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ACEP20577
T079463_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sob
M03674_2.00
Drosophila melanogaster
RCTACYGNRTTACGCV
BGCGTAAYNCRGTAGY
SELEX
Nitta et al.(2015)
sob_1
0.810
0.956
sob
M03675_2.00
Drosophila melanogaster
NGCGTAABNSNRGTAGY
RCTACYNSNVTTACGCN
SELEX
Nitta et al.(2015)
sob_2
0.810
0.956
sob
M06088_2.00
Drosophila melanogaster
GCTWCTGBDNBDV
BHVNHVCAGWAGC
B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892
0.810
0.956
sob
M06089_2.00
Drosophila melanogaster
BDGCTACYGKDBNN
NNVHMCRGTAGCHV
B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892
0.810
0.956
bowl
M03676_2.00
Drosophila melanogaster
GCGTAABACNRGKAGYN
NRCTMCYNGTVTTACGC
SELEX
Nitta et al.(2015)
bowl_1
0.806
0.930
bowl
M03677_2.00
Drosophila melanogaster
NGCTACYGTRTTACGCN
NGCGTAAYACRGTAGCN
SELEX
Nitta et al.(2015)
bowl_2
0.806
0.930
bowl
M06090_2.00
Drosophila melanogaster
RCTWCYGK
MCRGWAGY
B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893
0.806
0.930
OSR2
M04521_2.00
Homo sapiens
NGCTACYGBD
HVCRGTAGCN
SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX
0.787
0.877
OSR2
M08324_2.00
Homo sapiens
NBDGCTNCTGN
NCAGNAGCHVN
ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME
0.787
0.877
OSR2
M08908_2.00
Homo sapiens
NBHNYWGCTNCTSHDB
VHDSAGNAGCWRNDVN
Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C
0.787
0.877
OSR2
M04522_2.00
Homo sapiens
NGCTACTGND
HNCAGTAGCN
SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX
0.787
0.877
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACEP20577-PA
C2H2 ZF
299
321
FICKFCSRQFTKSYNLLIHERTH
ACEP20577-PA
C2H2 ZF
327
348
YSCDICGKAFRRQDHLRDHRNL
ACEP20577-PA
C2H2 ZF
371
393
FKCAECGKGFCQSRTLAVHKILH
ACEP20577-PA
C2H2 ZF
399
421
HKCPVCARSFNQRSNLKTHLLTH
ACEP20577-PA
C2H2 ZF
427
449
YHCASCGKVFRRNCDLRRHSLTH
Links
Other
C2H2 ZF
family TFs
Other
Atta cephalotes
TFs
107 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GB49914
Apis mellifera
GB49914
I
0.819
NV12185
Nasonia vitripennis
NV12185
I
0.819
SINV17987
Solenopsis invicta
SINV17987
I
0.819
AAEL007453
Aedes aegypti
AAEL007453
I
0.813
ADAC005347
Anopheles darlingi
ADAC005347
I
0.813
ODR1
Anopheles gambiae
AGAP007973
I
0.813
AATE001257
Anopheles atroparvus
AATE001257
I
0.813
ACOM030727
Anopheles coluzzii
ACOM030727
I
0.813
AEPI004813
Anopheles epiroticus
AEPI004813
I
0.813
AFAF004720
Anopheles farauti
AFAF004720
I
0.813
AFUN006320
Anopheles funestus
AFUN006320
I
0.813
AMEC005957
Anopheles melas
AMEC005957
I
0.813
AMEM017192
Anopheles merus
AMEM017192
I
0.813
AMIN006295
Anopheles minimus
AMIN006295
I
0.813
ASTEI01738
Anopheles stephensi
ASTEI01738
I
0.813
CpipJ_CPIJ010652
Culex pipiens
CpipJ_CPIJ010652
I
0.811
CPIJ010652
Culex quinquefasciatus
CPIJ010652
I
0.811
sob
Drosophila melanogaster
FBgn0004892
D
0.810
GG24427
Drosophila erecta
FBgn0116559
I
0.810
GI17769
Drosophila mojavensis
FBgn0140510
I
0.810
GL19470
Drosophila persimilis
FBgn0157069
I
0.810
GM18136
Drosophila sechellia
FBgn0173043
I
0.810
GJ17594
Drosophila virilis
FBgn0204764
I
0.810
GK15478
Drosophila willistoni
FBgn0217483
I
0.810
GE14841
Drosophila yakuba
FBgn0232433
I
0.810
GA25976
Drosophila pseudoobscura
FBgn0247353
I
0.810
PHUM125080
Pediculus humanus
PHUM125080
I
0.810
GF14663
Drosophila ananassae
FBgn0091690
I
0.808
GH13192
Drosophila grimshawi
FBgn0120669
I
0.808
GD22744
Drosophila simulans
FBgn0194140
I
0.807
Cflo_02188--XP_001120905.1_APIME
Camponotus floridanus
Cflo_02188--XP_001120905.1_APIME
I
0.807
AAEL008961
Aedes aegypti
AAEL008961
I
0.806
ACEP20581
Atta cephalotes
ACEP20581
I
0.806
ADAC010373
Anopheles darlingi
ADAC010373
I
0.806
ODR2
Anopheles gambiae
AGAP008222
I
0.806
bowl
Drosophila melanogaster
FBgn0004893
D
0.806
GA10014
Drosophila pseudoobscura
FBgn0070073
I
0.806
GF15254
Drosophila ananassae
FBgn0092279
I
0.806
GG24967
Drosophila erecta
FBgn0117096
I
0.806
GH13710
Drosophila grimshawi
FBgn0121186
I
0.806
GI23940
Drosophila mojavensis
FBgn0146665
I
0.806
GL18676
Drosophila persimilis
FBgn0156277
I
0.806
GM18435
Drosophila sechellia
FBgn0173342
I
0.806
GD23254
Drosophila simulans
FBgn0194642
I
0.806
GJ21213
Drosophila virilis
FBgn0208346
I
0.806
GK14650
Drosophila willistoni
FBgn0216656
I
0.806
GE18258
Drosophila yakuba
FBgn0235686
I
0.806
GB49901
Apis mellifera
GB49901
I
0.806
KGM_20290
Danaus plexippus
KGM_20290
I
0.806
L798_02536
Zootermopsis nevadensis
L798_02536
I
0.806
MCINX006060
Melitaea cinxia
MCINX006060
I
0.806
PHUM445550
Pediculus humanus
PHUM445550
I
0.806
SINV18115
Solenopsis invicta
SINV18115
I
0.806
TC005784
Tribolium castaneum
TC005784
I
0.806
Cflo_02191--XP_393879.3_APIME
Camponotus floridanus
Cflo_02191--XP_393879.3_APIME
I
0.806
LCUP002070
Lucilia cuprina
LCUP002070
I
0.806
MDOA005526
Musca domestica
MDOA005526
I
0.806
DAPPUDRAFT_238529
Daphnia pulex
DAPPUDRAFT_238529
I
0.805
LCUP002077
Lucilia cuprina
LCUP002077
I
0.805
MDOA011451
Musca domestica
MDOA011451
I
0.805
ACYPI008391
Acyrthosiphon pisum
ACYPI008391
I
0.804
NV12189
Nasonia vitripennis
NV12189
I
0.803
TC005788
Tribolium castaneum
TC005788
I
0.803
YQE_05719
Dendroctonus ponderosae
YQE_05719
I
0.803
ACYPI007518
Acyrthosiphon pisum
ACYPI007518
I
0.801
DAPPUDRAFT_347540
Daphnia pulex
DAPPUDRAFT_347540
I
0.801
ISCW005884
Ixodes scapularis
ISCW005884
I
0.801
ISCW017921
Ixodes scapularis
ISCW017921
I
0.801
estExt_fgenesh2_pg.C_1600105
Branchiostoma floridae
estExt_fgenesh2_pg.C_1600105
I
0.797
estExt_fgenesh2_pg.C_1600113
Branchiostoma floridae
estExt_fgenesh2_pg.C_1600113
I
0.797
fgenesh2_pg.scaffold_160000107
Branchiostoma floridae
fgenesh2_pg.scaffold_160000107
I
0.797
fgenesh2_pg.scaffold_160000114
Branchiostoma floridae
fgenesh2_pg.scaffold_160000114
I
0.797
L798_02529
Zootermopsis nevadensis
L798_02529
I
0.794
SMAR005255
Strigamia maritima
SMAR005255
I
0.792
PHUM125070
Pediculus humanus
PHUM125070
I
0.789
ENSAMEG00000000519
Ailuropoda melanoleuca
ENSAMEG00000000519
I
0.787
OSR2
Canis familiaris
ENSCAFG00000000493
I
0.787
OSR2
Callithrix jacchus
ENSCJAG00000015627
I
0.787
Osr2
Dipodomys ordii
ENSDORG00000011823
I
0.787
OSR2
Equus caballus
ENSECAG00000017784
I
0.787
OSR2
Erinaceus europaeus
ENSEEUG00000008304
I
0.787
ENSFALG00000005731
Ficedula albicollis
ENSFALG00000005731
I
0.787
OSR2
Homo sapiens
ENSG00000164920
D
0.787
ENSGALG00000016016
Gallus gallus
ENSGALG00000016016
I
0.787
OSR2
Gorilla gorilla
ENSGGOG00000006716
I
0.787
OSR2
Microcebus murinus
ENSMICG00000004390
I
0.787
OSR2
Macaca mulatta
ENSMMUG00000022185
I
0.787
ENSNLEG00000002725
Nomascus leucogenys
ENSNLEG00000002725
I
0.787
ENSOARG00000002902
Ovis aries
ENSOARG00000002902
I
0.787
OSR2
Otolemur garnettii
ENSOGAG00000007928
I
0.787
ENSONIG00000006859
Oreochromis niloticus
ENSONIG00000006859
I
0.787
OSR2
Ochotona princeps
ENSOPRG00000005325
I
0.787
osr2
Oryzias latipes
ENSORLG00000002797
I
0.787
OSR2
Procavia capensis
ENSPCAG00000003419
I
0.787
ENSPPYG00000018781
Pongo abelii
ENSPPYG00000018781
I
0.787
OSR2
Pan troglodytes
ENSPTRG00000020463
I
0.787
OSR2
Pteropus vampyrus
ENSPVAG00000004363
I
0.787
ENSSHAG00000007793
Sarcophilus harrisii
ENSSHAG00000007793
I
0.787
osr2
Takifugu rubripes
ENSTRUG00000011070
I
0.787
ENSTSYG00000013426
Tarsius syrichta
ENSTSYG00000013426
I
0.787
OSR2
Tursiops truncatus
ENSTTRG00000007477
I
0.787
ENSMMUP00000029201
Macaca fascicularis
ENSMMUP00000029201
I
0.787
XP_002934454
Xenopus tropicalis
XP_002934454
I
0.787
Sakowv30016612m.g
Saccoglossus kowalevskii
Sakowv30016612m.g
I
0.785
SMAR002904
Strigamia maritima
SMAR002904
I
0.780
tetur09g03230
Tetranychus urticae
tetur09g03230
I
0.780
SPU_024877
Strongylocentrotus purpuratus
SPU_024877
I
0.777