ENSCING00000021903 (Ciona intestinalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCING00000021903 T089139_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OSR2
M04521_2.00 		Homo sapiens
NGCTACYGBD
HVCRGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX 		0.767 0.809
OSR2
M08324_2.00 		Homo sapiens
NBDGCTNCTGN
NCAGNAGCHVN		 ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME 		0.767 0.809
OSR2
M08908_2.00 		Homo sapiens
NBHNYWGCTNCTSHDB
VHDSAGNAGCWRNDVN		 Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C 		0.767 0.809
OSR2
M04522_2.00 		Homo sapiens
NGCTACTGND
HNCAGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX 		0.767 0.809
sob
M03674_2.00 		Drosophila melanogaster
RCTACYGNRTTACGCV
BGCGTAAYNCRGTAGY		 SELEX
Nitta et al.(2015)
sob_1 		0.758 0.774
sob
M03675_2.00 		Drosophila melanogaster
NGCGTAABNSNRGTAGY
RCTACYNSNVTTACGCN		 SELEX
Nitta et al.(2015)
sob_2 		0.758 0.774
sob
M06088_2.00 		Drosophila melanogaster
GCTWCTGBDNBDV
BHVNHVCAGWAGC		 B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892 		0.758 0.774
sob
M06089_2.00 		Drosophila melanogaster
BDGCTACYGKDBNN
NNVHMCRGTAGCHV		 B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892 		0.758 0.774
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCINP00000030745 C2H2 ZF 171 193
ENSCINP00000030745 C2H2 ZF 199 221
ENSCINP00000030745 C2H2 ZF 227 249
ENSCINP00000030745 C2H2 ZF 255 277
ENSCINP00000030745 C2H2 ZF 283 305

Links

Other C2H2 ZF family TFs
Other Ciona intestinalis TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSFALG00000005731 Ficedula albicollis ENSFALG00000005731 I 0.777
ENSSHAG00000007793 Sarcophilus harrisii ENSSHAG00000007793 I 0.777
Sakowv30016612m.g Saccoglossus kowalevskii Sakowv30016612m.g I 0.777
ENSGALG00000016016 Gallus gallus ENSGALG00000016016 I 0.774
SMAR005255 Strigamia maritima SMAR005255 I 0.768
ENSAMEG00000000519 Ailuropoda melanoleuca ENSAMEG00000000519 I 0.767
OSR2 Canis familiaris ENSCAFG00000000493 I 0.767
OSR2 Callithrix jacchus ENSCJAG00000015627 I 0.767
OSR2 Equus caballus ENSECAG00000017784 I 0.767
OSR2 Erinaceus europaeus ENSEEUG00000008304 I 0.767
OSR2 Homo sapiens ENSG00000164920 D 0.767
OSR2 Gorilla gorilla ENSGGOG00000006716 I 0.767
OSR2 Microcebus murinus ENSMICG00000004390 I 0.767
OSR2 Macaca mulatta ENSMMUG00000022185 I 0.767
ENSNLEG00000002725 Nomascus leucogenys ENSNLEG00000002725 I 0.767
ENSOARG00000002902 Ovis aries ENSOARG00000002902 I 0.767
OSR2 Otolemur garnettii ENSOGAG00000007928 I 0.767
OSR2 Ochotona princeps ENSOPRG00000005325 I 0.767
OSR2 Procavia capensis ENSPCAG00000003419 I 0.767
ENSPPYG00000018781 Pongo abelii ENSPPYG00000018781 I 0.767
OSR2 Pan troglodytes ENSPTRG00000020463 I 0.767
OSR2 Pteropus vampyrus ENSPVAG00000004363 I 0.767
ENSTSYG00000013426 Tarsius syrichta ENSTSYG00000013426 I 0.767
OSR2 Tursiops truncatus ENSTTRG00000007477 I 0.767
ENSMMUP00000029201 Macaca fascicularis ENSMMUP00000029201 I 0.767
XP_002934454 Xenopus tropicalis XP_002934454 I 0.767
Osr2 Dipodomys ordii ENSDORG00000011823 I 0.765
ENSONIG00000006859 Oreochromis niloticus ENSONIG00000006859 I 0.765
osr2 Oryzias latipes ENSORLG00000002797 I 0.765
osr2 Takifugu rubripes ENSTRUG00000011070 I 0.765
ISCW005884 Ixodes scapularis ISCW005884 I 0.763
ISCW017921 Ixodes scapularis ISCW017921 I 0.763
PHUM125070 Pediculus humanus PHUM125070 I 0.761
KGM_20290 Danaus plexippus KGM_20290 I 0.760
MCINX006060 Melitaea cinxia MCINX006060 I 0.760
sob Drosophila melanogaster FBgn0004892 D 0.758
GF14663 Drosophila ananassae FBgn0091690 I 0.758
GG24427 Drosophila erecta FBgn0116559 I 0.758
GH13192 Drosophila grimshawi FBgn0120669 I 0.758
GI17769 Drosophila mojavensis FBgn0140510 I 0.758
GL19470 Drosophila persimilis FBgn0157069 I 0.758
GM18136 Drosophila sechellia FBgn0173043 I 0.758
GD22744 Drosophila simulans FBgn0194140 I 0.758
GJ17594 Drosophila virilis FBgn0204764 I 0.758
GK15478 Drosophila willistoni FBgn0217483 I 0.758
GE14841 Drosophila yakuba FBgn0232433 I 0.758
GA25976 Drosophila pseudoobscura FBgn0247353 I 0.758
TC005788 Tribolium castaneum TC005788 I 0.758
YQE_05719 Dendroctonus ponderosae YQE_05719 I 0.758
LCUP002077 Lucilia cuprina LCUP002077 I 0.758
MDOA011451 Musca domestica MDOA011451 I 0.758
ACYPI007518 Acyrthosiphon pisum ACYPI007518 I 0.756
SMAR002904 Strigamia maritima SMAR002904 I 0.756