ENSBTAP00000016859-D1 (Bos grunniens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ENSBTAP00000016859-D1 T134557_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF454
M04571_2.00 		Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW		 SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1 		0.827 0.989
ZNF454
M04572_2.00 		Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA		 SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2 		0.827 0.989
ZNF454
M08346_2.00 		Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB
VAAWGGCHCHNGGCCCYKRNDGNYBBM		 ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE 		0.827 0.989
ZNF454
M08256_2.00 		Homo sapiens
GWGCYTT
AARGCWC		 ChIP-seq
Najafabadi et al.(2015b)
ZNF454 		0.827 0.989
ZNF454
M07651_2.00 		Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB
VRMNGGCTCBVGGBCCYGRBRGDYBBMYG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping 		0.827 0.989
ZNF454
M04573_2.00 		Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW		 SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1 		0.827 0.989
ZNF454
M04574_2.00 		Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA		 SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2 		0.827 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000016859-D1 C2H2 ZF 182 204
ENSBTAP00000016859-D1 C2H2 ZF 221 243
ENSBTAP00000016859-D1 C2H2 ZF 249 271
ENSBTAP00000016859-D1 C2H2 ZF 277 299
ENSBTAP00000016859-D1 C2H2 ZF 305 327
ENSBTAP00000016859-D1 C2H2 ZF 333 355
ENSBTAP00000016859-D1 C2H2 ZF 361 383
ENSBTAP00000016859-D1 C2H2 ZF 389 411
ENSBTAP00000016859-D1 C2H2 ZF 417 439
ENSBTAP00000016859-D1 C2H2 ZF 445 467
ENSBTAP00000016859-D1 C2H2 ZF 473 495
ENSBTAP00000016859-D1 C2H2 ZF 501 523

Links

Other C2H2 ZF family TFs
Other Bos grunniens TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R001234 Calypte anna Aan_R001234 I
Afo_R013084 Aptenodytes forsteri Afo_R013084 I
Brh_R009865 Buceros rhinoceros Brh_R009865 I
Cmyd_10014359 Chelonia mydas Cmyd_10014359 I
ENSAMEG00000005407 Ailuropoda melanoleuca ENSAMEG00000005407 I
ENSAPLG00000002762 Anas platyrhynchos ENSAPLG00000002762 I
ENSCSAG00000006941 Chlorocebus sabaeus ENSCSAG00000006941 I
ENSFALG00000006027 Ficedula albicollis ENSFALG00000006027 I
ENSMMUP00000039977 Macaca fascicularis ENSMMUP00000039977 I
ENSMPUG00000000272 Mustela putorius furo ENSMPUG00000000272 I
ENSORLG00000006797 Oryzias latipes ENSORLG00000006797 I
ENSP00000419153-D1 Bos grunniens ENSP00000419153-D1 I
ENSPANG00000015935 Papio anubis ENSPANG00000015935 I
ENSPPYG00000013526 Pongo abelii ENSPPYG00000013526 I
ENSSHAG00000009719 Sarcophilus harrisii ENSSHAG00000009719 I
ENSSSCG00000021456 Sus scrofa ENSSSCG00000021456 I
ENSSTOG00000001832 Ictidomys tridecemlineatus ENSSTOG00000001832 I
ENSTSYG00000009685 Tarsius syrichta ENSTSYG00000009685 I
Gfo_R000202 Geospiza fortis Gfo_R000202 I
Ogr18740 Ophisaurus gracilis Ogr18740 I
Pvit_00937 Pogona vitticeps Pvit_00937 I
XP_002939695 Xenopus tropicalis XP_002939695 I
ZBTB20 Homo sapiens ENSG00000181722 D
ZBTB20 Anolis carolinensis ENSACAG00000009851 I
ZBTB20 Bos taurus ENSBTAG00000011928 I
ZBTB20 Canis familiaris ENSCAFG00000010823 I
ZBTB20 Callithrix jacchus ENSCJAG00000009211 I
ZBTB20 Cavia porcellus ENSCPOG00000021801 I
ZBTB20 Dasypus novemcinctus ENSDNOG00000042525 I
Zbtb20 Dipodomys ordii ENSDORG00000008535 I
ZBTB20 Equus caballus ENSECAG00000015809 I
ZBTB20 Erinaceus europaeus ENSEEUG00000005612 I
ZBTB20 Echinops telfairi ENSETEG00000013007 I
ZBTB20 Felis catus ENSFCAG00000022767 I
zbtb20 Takifugu rubripes ENSTRUG00000016839 I
zbtb20 Tetraodon nigroviridis ENSTNIG00000010038 I
ZBTB20 Taeniopygia guttata ENSTGUG00000013404 I
ZBTB20 Tupaia belangeri ENSTBEG00000016630 I
ZBTB20 Myotis lucifugus ENSMLUG00000014239 I
ZBTB20 Sus scrofa ENSSSCG00000026113 I
zbtb20 Gasterosteus aculeatus ENSGACG00000020693 I
ZBTB20 Gallus gallus ENSGALG00000015094 I
ZBTB20 Sorex araneus ENSSARG00000013404 I
Zbtb20 Rattus norvegicus ENSRNOG00000056716 I
ZBTB20 Pan troglodytes ENSPTRG00000015244 I
ZBTB20 Gorilla gorilla ENSGGOG00000025065 I
ZBTB20 Loxodonta africana ENSLAFG00000002752 I
ZBTB20 Meleagris gallopavo ENSMGAG00000014320 I
ZBTB20 Otolemur garnettii ENSOGAG00000029972 I
ZBTB20 Oryctolagus cuniculus ENSOCUG00000004232 I
Zbtb20 Mus musculus ENSMUSG00000022708 I
ZBTB20 Microcebus murinus ENSMICG00000008815 I
ZBTB20 Monodelphis domestica ENSMODG00000018181 I