Gfo_R000202 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R000202 T135644_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB20
M04599_2.00 		Homo sapiens
NVYATACRTYVN
NBRAYGTATRBN		 SELEX
Yin et al.(2017)
ZBTB20_eDBD_HT-SELEX 		0.783 0.991
ZBTB20
M04600_2.00 		Homo sapiens
NVYATACRTTNN
NNAAYGTATRBN		 SELEX
Yin et al.(2017)
ZBTB20_eDBD_Methyl-HT-SELEX 		0.783 0.991
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R000202 C2H2 ZF 577 599
Gfo_R000202 C2H2 ZF 605 627
Gfo_R000202 C2H2 ZF 633 655
Gfo_R000202 C2H2 ZF 661 683
Gfo_R000202 C2H2 ZF 713 735

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZBTB20 Anolis carolinensis ENSACAG00000009851 I 0.827
ENSAPLG00000002762 Anas platyrhynchos ENSAPLG00000002762 I 0.827
ENSFALG00000006027 Ficedula albicollis ENSFALG00000006027 I 0.827
ZBTB20 Gallus gallus ENSGALG00000015094 I 0.827
ZBTB20 Meleagris gallopavo ENSMGAG00000014320 I 0.827
ZBTB20 Monodelphis domestica ENSMODG00000018181 I 0.827
ENSSHAG00000009719 Sarcophilus harrisii ENSSHAG00000009719 I 0.827
ZBTB20 Taeniopygia guttata ENSTGUG00000013404 I 0.827
Aan_R001234 Calypte anna Aan_R001234 I 0.827
Afo_R013084 Aptenodytes forsteri Afo_R013084 I 0.827
Brh_R009865 Buceros rhinoceros Brh_R009865 I 0.827
Cmyd_10014359 Chelonia mydas Cmyd_10014359 I 0.827
Ogr18740 Ophisaurus gracilis Ogr18740 I 0.827
Pvit_00937 Pogona vitticeps Pvit_00937 I 0.827
zbtb20 Gasterosteus aculeatus ENSGACG00000020693 I 0.815
zbtb20 Tetraodon nigroviridis ENSTNIG00000010038 I 0.815
zbtb20 Takifugu rubripes ENSTRUG00000016839 I 0.815
ENSORLG00000006797 Oryzias latipes ENSORLG00000006797 I 0.813
ENSAMEG00000005407 Ailuropoda melanoleuca ENSAMEG00000005407 I 0.783
ZBTB20 Bos taurus ENSBTAG00000011928 I 0.783
ZBTB20 Canis familiaris ENSCAFG00000010823 I 0.783
ZBTB20 Callithrix jacchus ENSCJAG00000009211 I 0.783
ZBTB20 Cavia porcellus ENSCPOG00000021801 I 0.783
ENSCSAG00000006941 Chlorocebus sabaeus ENSCSAG00000006941 I 0.783
ZBTB20 Dasypus novemcinctus ENSDNOG00000042525 I 0.783
Zbtb20 Dipodomys ordii ENSDORG00000008535 I 0.783
ZBTB20 Equus caballus ENSECAG00000015809 I 0.783
ZBTB20 Erinaceus europaeus ENSEEUG00000005612 I 0.783
ZBTB20 Felis catus ENSFCAG00000022767 I 0.783
ZBTB20 Homo sapiens ENSG00000181722 D 0.783
ZBTB20 Gorilla gorilla ENSGGOG00000025065 I 0.783
ZBTB20 Loxodonta africana ENSLAFG00000002752 I 0.783
ZBTB20 Microcebus murinus ENSMICG00000008815 I 0.783
ZBTB20 Myotis lucifugus ENSMLUG00000014239 I 0.783
ENSMPUG00000000272 Mustela putorius furo ENSMPUG00000000272 I 0.783
Zbtb20 Mus musculus ENSMUSG00000022708 I 0.783
ZBTB20 Oryctolagus cuniculus ENSOCUG00000004232 I 0.783
ZBTB20 Otolemur garnettii ENSOGAG00000029972 I 0.783
ENSPANG00000015935 Papio anubis ENSPANG00000015935 I 0.783
ENSPPYG00000013526 Pongo abelii ENSPPYG00000013526 I 0.783
ZBTB20 Pan troglodytes ENSPTRG00000015244 I 0.783
Zbtb20 Rattus norvegicus ENSRNOG00000056716 I 0.783
ZBTB20 Sorex araneus ENSSARG00000013404 I 0.783
ENSSSCG00000021456 Sus scrofa ENSSSCG00000021456 I 0.783
ZBTB20 Sus scrofa ENSSSCG00000026113 I 0.783
ENSSTOG00000001832 Ictidomys tridecemlineatus ENSSTOG00000001832 I 0.783
ZBTB20 Tupaia belangeri ENSTBEG00000016630 I 0.783
ENSTSYG00000009685 Tarsius syrichta ENSTSYG00000009685 I 0.783
ENSMMUP00000039977 Macaca fascicularis ENSMMUP00000039977 I 0.783
ENSP00000419153-D1 Bos grunniens ENSP00000419153-D1 I 0.783
Myotis_brandtii_ZBTB20_10031765 Myotis brandtii Myotis_brandtii_ZBTB20_10031765 I 0.783
XP_002939695 Xenopus tropicalis XP_002939695 I 0.783
ZBTB20 Echinops telfairi ENSETEG00000013007 I 0.759