Gfo_R006219 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R006219 T135734_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R006219 C2H2 ZF 230 254
Gfo_R006219 C2H2 ZF 291 315

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30001.m000076 Ricinus communis 30001.m000076 N
AT3G07565 Arabidopsis thaliana AT3G07565 N
Bostr.22252s0273 Boechera stricta Bostr.22252s0273 N
Cagra.0133s0101 Capsella grandiflora Cagra.0133s0101 N
Carubv10014434m.g Capsella rubella Carubv10014434m.g N
cassava11790.valid.m1 Manihot esculenta cassava11790.valid.m1 N
cassava11791.valid.m1 Manihot esculenta cassava11791.valid.m1 N
cassava11792.valid.m1 Manihot esculenta cassava11792.valid.m1 N
Ca_02700 Cicer arietinum Ca_02700 N
chr3.CM0106.670.nc Lotus japonicus chr3.CM0106.670.nc N
Ciclev10021850m.g Citrus clementina Ciclev10021850m.g N
Cla012999 Citrullus lanatus Cla012999 N
Cucsa.095530 Cucumis sativus Cucsa.095530 N
fgenesh2_kg.3__781__AT3G07565.3 Arabidopsis lyrata fgenesh2_kg.3__781__AT3G07565.3 N
gene17671-v1.0-hybrid Fragaria vesca gene17671-v1.0-hybrid N
Gorai.011G138900 Gossypium raimondii Gorai.011G138900 N
GSMUA_Achr3G19260_001 Musa acuminata GSMUA_Achr3G19260_001 N
GSMUA_Achr6G28720_001 Musa acuminata GSMUA_Achr6G28720_001 N
Lus10025581.g Linum usitatissimum Lus10025581.g N
Lus10025582.g Linum usitatissimum Lus10025582.g N
Lus10027045.g Linum usitatissimum Lus10027045.g N
MDP0000184998 Malus domestica MDP0000184998 N
MDP0000716430 Malus domestica MDP0000716430 N
orange1.1g025458m.g Citrus sinensis orange1.1g025458m.g N
POPTR_0017s05170 Populus trichocarpa POPTR_0017s05170 N
PRUPE_ppa010592mg Prunus persica PRUPE_ppa010592mg N
SapurV1A.0947s0070 Salix purpurea SapurV1A.0947s0070 N
SapurV1A.1186s0090 Salix purpurea SapurV1A.1186s0090 N
Solyc09g020000.2 Solanum lycopersicum Solyc09g020000.2 N
TCM_019960 Theobroma cacao TCM_019960 N
TCM_019968 Theobroma cacao TCM_019968 N