Pm021284 (Prunus mume)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pm021284 T136821_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.822 0.913
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.803 0.913
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.799 0.717
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.799 0.696
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.796 0.848
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.796 0.848
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.796 0.848
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.787 0.804
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.787 0.804
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.776 0.696
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm021284 C2H2 ZF 85 107
Pm021284 C2H2 ZF 137 159

Links

Other C2H2 ZF family TFs
Other Prunus mume TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R003923 Calypte anna Aan_R003923 I
Aan_R015393 Calypte anna Aan_R015393 I
Afo_R002230 Aptenodytes forsteri Afo_R002230 I
Afo_R015753 Aptenodytes forsteri Afo_R015753 I
Alligator_sinensis_CCG017490.1 Alligator sinensis Alligator_sinensis_CCG017490.1 I
Brh_R003016 Buceros rhinoceros Brh_R003016 I
Brh_R013325 Buceros rhinoceros Brh_R013325 I
ENSAMEG00000000278 Ailuropoda melanoleuca ENSAMEG00000000278 I
ENSAMEG00000011320 Ailuropoda melanoleuca ENSAMEG00000011320 I
ENSAMXG00000000221 Astyanax mexicanus ENSAMXG00000000221 I
ENSAMXG00000016712 Astyanax mexicanus ENSAMXG00000016712 I
ENSAPLG00000002882 Anas platyrhynchos ENSAPLG00000002882 I
ENSAPLG00000008667 Anas platyrhynchos ENSAPLG00000008667 I
ENSCSAG00000007158 Chlorocebus sabaeus ENSCSAG00000007158 I
ENSCSAG00000011989 Chlorocebus sabaeus ENSCSAG00000011989 I
ENSFALG00000005879 Ficedula albicollis ENSFALG00000005879 I
ENSFALG00000006639 Ficedula albicollis ENSFALG00000006639 I
ENSGALG00000014208 Gallus gallus ENSGALG00000014208 I
ENSGALG00000016439 Gallus gallus ENSGALG00000016439 I
ENSLACG00000006172 Latimeria chalumnae ENSLACG00000006172 I
ENSLOCG00000009655 Lepisosteus oculatus ENSLOCG00000009655 I
ENSLOCG00000016835 Lepisosteus oculatus ENSLOCG00000016835 I
ENSMMUP00000002046 Macaca fascicularis ENSMMUP00000002046 I
ENSMPUG00000013263 Mustela putorius furo ENSMPUG00000013263 I
ENSMPUG00000015153 Mustela putorius furo ENSMPUG00000015153 I
ENSNLEG00000003271 Nomascus leucogenys ENSNLEG00000003271 I
ENSNLEG00000013634 Nomascus leucogenys ENSNLEG00000013634 I
ENSOARG00000015298 Ovis aries ENSOARG00000015298 I
ENSOARG00000018325 Ovis aries ENSOARG00000018325 I
ENSONIG00000002710 Oreochromis niloticus ENSONIG00000002710 I
ENSONIG00000003707 Oreochromis niloticus ENSONIG00000003707 I
ENSP00000251808-D1 Bos grunniens ENSP00000251808-D1 I
ENSP00000379261 Macaca fascicularis ENSP00000379261 I
ENSPANG00000017807 Papio anubis ENSPANG00000017807 I
ENSPANG00000020814 Papio anubis ENSPANG00000020814 I
ENSPFOG00000004774 Poecilia formosa ENSPFOG00000004774 I
ENSPFOG00000006095 Poecilia formosa ENSPFOG00000006095 I
ENSPMAG00000005869 Petromyzon marinus ENSPMAG00000005869 I
ENSPPYG00000012661 Pongo abelii ENSPPYG00000012661 I
ENSPPYG00000018794 Pongo abelii ENSPPYG00000018794 I
ENSPSIG00000003669 Pelodiscus sinensis ENSPSIG00000003669 I
ENSPSIG00000010930 Pelodiscus sinensis ENSPSIG00000010930 I
ENSSHAG00000002291 Sarcophilus harrisii ENSSHAG00000002291 I
ENSSHAG00000015849 Sarcophilus harrisii ENSSHAG00000015849 I
ENSSTOG00000001498 Ictidomys tridecemlineatus ENSSTOG00000001498 I
ENSSTOG00000019842 Ictidomys tridecemlineatus ENSSTOG00000019842 I
ENSTGUG00000012086 Taeniopygia guttata ENSTGUG00000012086 I
ENSXMAG00000003725 Xiphophorus maculatus ENSXMAG00000003725 I
ENSXMAG00000013267 Xiphophorus maculatus ENSXMAG00000013267 I
Gfo_R006019 Geospiza fortis Gfo_R006019 I
Gfo_R015266 Geospiza fortis Gfo_R015266 I
GRHL1 Anolis carolinensis ENSACAG00000000132 I
GRHL1 Canis familiaris ENSCAFG00000003394 I
GRHL1 Callithrix jacchus ENSCJAG00000006431 I
GRHL1 Cavia porcellus ENSCPOG00000010783 I
grhl1 Danio rerio ENSDARG00000061391 I
GRHL1 Dasypus novemcinctus ENSDNOG00000014493 I
GRHL1 Equus caballus ENSECAG00000015969 I
GRHL1 Homo sapiens ENSG00000134317 D
grhl1 Gasterosteus aculeatus ENSGACG00000008845 I
GRHL1 Gorilla gorilla ENSGGOG00000002692 I
GRHL1 Loxodonta africana ENSLAFG00000009330 I
GRHL1 Meleagris gallopavo ENSMGAG00000014007 I
GRHL1 Myotis lucifugus ENSMLUG00000002290 I
GRHL1 Macaca mulatta ENSMMUG00000001535 I
GRHL1 Monodelphis domestica ENSMODG00000014753 I
Grhl1 Mus musculus ENSMUSG00000020656 I
GRHL1 Ornithorhynchus anatinus ENSOANG00000007788 I
grhl1 Oryzias latipes ENSORLG00000015232 I
GRHL1 Pan troglodytes ENSPTRG00000011643 I
GRHL1 Taeniopygia guttata ENSTGUG00000013038 I
grhl1 Tetraodon nigroviridis ENSTNIG00000017317 I
grhl1 Takifugu rubripes ENSTRUG00000013628 I
GRHL1 Vicugna pacos ENSVPAG00000010842 I
grhl1.L Xenopus laevis XB-GENE-486580 I
GRHL2 Anolis carolinensis ENSACAG00000008759 I
GRHL2 Bos taurus ENSBTAG00000004518 I
GRHL2 Canis familiaris ENSCAFG00000000587 I
GRHL2 Callithrix jacchus ENSCJAG00000015886 I
GRHL2 Cavia porcellus ENSCPOG00000005630 I
GRHL2 Dasypus novemcinctus ENSDNOG00000048641 I
GRHL2 Equus caballus ENSECAG00000013681 I
GRHL2 Erinaceus europaeus ENSEEUG00000015263 I
GRHL2 Felis catus ENSFCAG00000004963 I
GRHL2 Homo sapiens ENSG00000083307 D
GRHL2 Gorilla gorilla ENSGGOG00000004401 I
GRHL2 Loxodonta africana ENSLAFG00000010356 I
GRHL2 Meleagris gallopavo ENSMGAG00000012259 I
GRHL2 Microcebus murinus ENSMICG00000014771 I
GRHL2 Myotis lucifugus ENSMLUG00000010961 I
GRHL2 Macaca mulatta ENSMMUG00000020995 I
GRHL2 Monodelphis domestica ENSMODG00000006048 I
Grhl2 Mus musculus ENSMUSG00000022286 D
GRHL2 Ornithorhynchus anatinus ENSOANG00000004305 I
GRHL2 Oryctolagus cuniculus ENSOCUG00000004750 I
GRHL2 Otolemur garnettii ENSOGAG00000004751 I
GRHL2 Pan troglodytes ENSPTRG00000020479 I
Grhl2 Rattus norvegicus ENSRNOG00000007000 I
GRHL2 Tursiops truncatus ENSTTRG00000005794 I
grhl2 Xenopus tropicalis XB-GENE-485995 I
grhl2a Danio rerio ENSDARG00000058342 I
grhl2a Tetraodon nigroviridis ENSTNIG00000013309 I
grhl2b Danio rerio ENSDARG00000061974 I
grhl2b Gasterosteus aculeatus ENSGACG00000003695 I
grhl2b Tetraodon nigroviridis ENSTNIG00000009151 I
grhl2b Takifugu rubripes ENSTRUG00000002119 I
Myotis_brandtii_GRHL2_10032153 Myotis brandtii Myotis_brandtii_GRHL2_10032153 I
nDi.2.2.2.g12300 Dirofilaria immitis nDi.2.2.2.g12300 I
Ogr11913 Ophisaurus gracilis Ogr11913 I
Pvit_03833 Pogona vitticeps Pvit_03833 I
SNAPOd2T00016626001 Oikopleura dioica SNAPOd2T00016626001 I
Tal_R012680 Tyto alba Tal_R012680 I
XP_002938935 Xenopus tropicalis XP_002938935 I