Alligator_sinensis_CCG017490.1 (Alligator sinensis)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 Alligator_sinensis_CCG017490.1 T199503_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRHL1
M03071_2.00 		Homo sapiens
RACYKGWHNDWCMGGTT
AACCKGWHNDWCMRGTY		 SELEX
Jolma et al.(2013)
GRHL1_1 		0.815 0.815
GRHL1
M03072_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Jolma et al.(2013)
GRHL1_2 		0.815 0.815
GRHL1
M03073_2.00 		Homo sapiens
HWAACCGGTTTD
HAAACCGGTTWD		 SELEX
Jolma et al.(2013)
GRHL1_3 		0.815 0.815
GRHL1
M04887_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_HT-SELEX 		0.815 0.815
GRHL1
M04888_2.00 		Homo sapiens
DAACMKGTTH
DAACMKGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_Methyl-HT-SELEX 		0.815 0.815
GRHL2
M08129_2.00 		Homo sapiens
NNNAACTGGTTTNNN
NNNAAACCAGTTNNN		 ChIP-seq
Mathelier et al.(2014)
MA1105.1 		0.774 0.774
GRHL2
M09125_2.00 		Homo sapiens
AACYDGYYBDDC
GHHVRRCHRGTT		 Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A 		0.774 0.774
Grhl2
M09126_2.00 		Mus musculus
RDCCDGTYYKDC
GHMRRACHGGHY		 Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A 		0.774 0.774
GRHL2
M09558_2.00 		Homo sapiens
NRAACHDGHHDDDCHDGTTY
RAACHDGHHHDDCHDGTTYN		 Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194 		0.774 0.774
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG017490.1 Grainyhead 202 343

Links

Other Grainyhead family TFs
Other Alligator sinensis TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAPLG00000008667 Anas platyrhynchos ENSAPLG00000008667 I 0.855
ENSFALG00000006639 Ficedula albicollis ENSFALG00000006639 I 0.855
ENSGALG00000016439 Gallus gallus ENSGALG00000016439 I 0.855
GRHL1 Meleagris gallopavo ENSMGAG00000014007 I 0.855
Aan_R015393 Calypte anna Aan_R015393 I 0.855
Afo_R015753 Aptenodytes forsteri Afo_R015753 I 0.855
Brh_R003016 Buceros rhinoceros Brh_R003016 I 0.855
Gfo_R015266 Geospiza fortis Gfo_R015266 I 0.855
Tal_R012680 Tyto alba Tal_R012680 I 0.855
GRHL1 Taeniopygia guttata ENSTGUG00000013038 I 0.847
ENSAMEG00000011320 Ailuropoda melanoleuca ENSAMEG00000011320 I 0.839
GRHL1 Bos taurus ENSBTAG00000007485 I 0.839
ENSCSAG00000007158 Chlorocebus sabaeus ENSCSAG00000007158 I 0.839
GRHL1 Dasypus novemcinctus ENSDNOG00000014493 I 0.839
GRHL1 Gorilla gorilla ENSGGOG00000002692 I 0.839
GRHL1 Myotis lucifugus ENSMLUG00000002290 I 0.839
GRHL1 Macaca mulatta ENSMMUG00000001535 I 0.839
GRHL1 Monodelphis domestica ENSMODG00000014753 I 0.839
ENSMPUG00000013263 Mustela putorius furo ENSMPUG00000013263 I 0.839
ENSNLEG00000013634 Nomascus leucogenys ENSNLEG00000013634 I 0.839
ENSSHAG00000002291 Sarcophilus harrisii ENSSHAG00000002291 I 0.839
ENSMMUP00000002046 Macaca fascicularis ENSMMUP00000002046 I 0.839
ENSP00000384209-D1 Bos grunniens ENSP00000384209-D1 I 0.839
Ogr04284 Ophisaurus gracilis Ogr04284 I 0.839
GRHL1 Homo sapiens ENSG00000134317 D 0.831
GRHL1 Ornithorhynchus anatinus ENSOANG00000007788 I 0.831
ENSPSIG00000010930 Pelodiscus sinensis ENSPSIG00000010930 I 0.831
XP_002938935 Xenopus tropicalis XP_002938935 I 0.831
GRHL1 Callithrix jacchus ENSCJAG00000006431 I 0.823
GRHL1 Felis catus ENSFCAG00000007856 I 0.823
GRHL1 Loxodonta africana ENSLAFG00000009330 I 0.823
ENSLOCG00000016835 Lepisosteus oculatus ENSLOCG00000016835 I 0.823
Grhl1 Mus musculus ENSMUSG00000020656 I 0.823
GRHL1 Otolemur garnettii ENSOGAG00000014342 I 0.823
ENSPANG00000020814 Papio anubis ENSPANG00000020814 I 0.823
ENSPPYG00000012661 Pongo abelii ENSPPYG00000012661 I 0.823
GRHL1 Pan troglodytes ENSPTRG00000011643 I 0.823
GRHL1 Pteropus vampyrus ENSPVAG00000002002 I 0.823
Myotis_brandtii_GRHL1_10020834 Myotis brandtii Myotis_brandtii_GRHL1_10020834 I 0.823
GRHL1 Oryctolagus cuniculus ENSOCUG00000017717 I 0.815
GRHL1 Vicugna pacos ENSVPAG00000010842 I 0.815
grhl1.L Xenopus laevis XB-GENE-486580 I 0.815
XP_002938936 Xenopus tropicalis XP_002938936 I 0.815
grhl1 Danio rerio ENSDARG00000061391 I 0.806
ENSONIG00000003707 Oreochromis niloticus ENSONIG00000003707 I 0.806
grhl1 Oryzias latipes ENSORLG00000015232 I 0.806
ENSPFOG00000004774 Poecilia formosa ENSPFOG00000004774 I 0.798
ENSXMAG00000013267 Xiphophorus maculatus ENSXMAG00000013267 I 0.798
grhl1 Takifugu rubripes ENSTRUG00000013628 I 0.790
grhl1 Tetraodon nigroviridis ENSTNIG00000017317 I 0.782
ENSAMEG00000000278 Ailuropoda melanoleuca ENSAMEG00000000278 I 0.774
GRHL2 Bos taurus ENSBTAG00000004518 I 0.774
GRHL2 Canis familiaris ENSCAFG00000000587 I 0.774
GRHL2 Callithrix jacchus ENSCJAG00000015886 I 0.774
ENSCSAG00000011989 Chlorocebus sabaeus ENSCSAG00000011989 I 0.774
GRHL2 Dasypus novemcinctus ENSDNOG00000048641 I 0.774
GRHL2 Equus caballus ENSECAG00000013681 I 0.774
GRHL2 Felis catus ENSFCAG00000004963 I 0.774
GRHL2 Homo sapiens ENSG00000083307 D 0.774
GRHL2 Gorilla gorilla ENSGGOG00000004401 I 0.774
GRHL2 Loxodonta africana ENSLAFG00000010356 I 0.774
GRHL2 Microcebus murinus ENSMICG00000014771 I 0.774
GRHL2 Myotis lucifugus ENSMLUG00000010961 I 0.774
ENSMPUG00000015153 Mustela putorius furo ENSMPUG00000015153 I 0.774
Grhl2 Mus musculus ENSMUSG00000022286 D 0.774
ENSNLEG00000003271 Nomascus leucogenys ENSNLEG00000003271 I 0.774
GRHL2 Ornithorhynchus anatinus ENSOANG00000004305 I 0.774
ENSOARG00000018325 Ovis aries ENSOARG00000018325 I 0.774
GRHL2 Oryctolagus cuniculus ENSOCUG00000004750 I 0.774
GRHL2 Otolemur garnettii ENSOGAG00000004751 I 0.774
ENSPANG00000017807 Papio anubis ENSPANG00000017807 I 0.774
ENSPPYG00000018794 Pongo abelii ENSPPYG00000018794 I 0.774
GRHL2 Pan troglodytes ENSPTRG00000020479 I 0.774
Grhl2 Rattus norvegicus ENSRNOG00000007000 I 0.774
ENSSHAG00000015849 Sarcophilus harrisii ENSSHAG00000015849 I 0.774
GRHL2 Sus scrofa ENSSSCG00000006060 I 0.774
GRHL2 Tursiops truncatus ENSTTRG00000005794 I 0.774
ENSP00000251808-D1 Bos grunniens ENSP00000251808-D1 I 0.774
Myotis_brandtii_GRHL2_10032153 Myotis brandtii Myotis_brandtii_GRHL2_10032153 I 0.774
grhl2 Xenopus tropicalis XB-GENE-485995 I 0.774
ENSAPLG00000002882 Anas platyrhynchos ENSAPLG00000002882 I 0.766
grhl2b Danio rerio ENSDARG00000061974 I 0.766
grhl1 Gasterosteus aculeatus ENSGACG00000008845 I 0.766
ENSGALG00000014208 Gallus gallus ENSGALG00000014208 I 0.766
GRHL2 Meleagris gallopavo ENSMGAG00000012259 I 0.766
ENSPSIG00000003669 Pelodiscus sinensis ENSPSIG00000003669 I 0.766
ENSTGUG00000012086 Taeniopygia guttata ENSTGUG00000012086 I 0.766
Cmyd_10003336 Chelonia mydas Cmyd_10003336 I 0.766
Gfo_R006019 Geospiza fortis Gfo_R006019 I 0.766
ENSONIG00000002710 Oreochromis niloticus ENSONIG00000002710 I 0.758
ENSPFOG00000006095 Poecilia formosa ENSPFOG00000006095 I 0.758
grhl2b Takifugu rubripes ENSTRUG00000002119 I 0.758
ENSXMAG00000003725 Xiphophorus maculatus ENSXMAG00000003725 I 0.758
Pvit_03833 Pogona vitticeps Pvit_03833 I 0.758
ENSAMXG00000000221 Astyanax mexicanus ENSAMXG00000000221 I 0.750
ENSLACG00000006172 Latimeria chalumnae ENSLACG00000006172 I 0.750
ENSLOCG00000009655 Lepisosteus oculatus ENSLOCG00000009655 I 0.750
grhl2a Danio rerio ENSDARG00000058342 I 0.742
grhl2b Tetraodon nigroviridis ENSTNIG00000009151 I 0.742
ENSPFOG00000010589 Poecilia formosa ENSPFOG00000010589 N 0.702