CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgeneshMC_pg.C_10568
(
Mucor circinelloides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgeneshMC_pg.C_10568
T138814_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RO3G_05801
M01434_2.00
Rhizopus oryzae
NNGATYNNCN
NGNNRATCNN
PBM
Najafabadi et al.(2015a)
pTH10221
0.763
0.804
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgeneshMC_pg.C_10568
C2H2 ZF
261
283
YVCPYCHKKFSRPSSLRIHTYSH
estExt_fgeneshMC_pg.C_10568
C2H2 ZF
289
313
FVCTEPGCGRHFSVQSNMRRHLRVH
Links
Other
C2H2 ZF
family TFs
Other
Mucor circinelloides
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PHLGIDRAFT_93775
Phlebiopsis gigantea
PHLGIDRAFT_93775
N
PIIN_00052
Piriformospora indica
PIIN_00052
N
V565_004660
Rhizoctonia solani
V565_004660
N