gw1.3.584.1 (Phycomyces blakesleeanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 gw1.3.584.1 T140067_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RO3G_05801
M01434_2.00 		Rhizopus oryzae
NNGATYNNCN
NGNNRATCNN		 PBM
Najafabadi et al.(2015a)
pTH10221 		0.782 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.3.584.1 C2H2 ZF 9 31
gw1.3.584.1 C2H2 ZF 37 61

Links

Other C2H2 ZF family TFs
Other Phycomyces blakesleeanus TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMSG_09258 Thecamonas trahens AMSG_09258 N
BGIOSGA003060 Oryza indica BGIOSGA003060 N
BGIOSGA036408 Oryza indica BGIOSGA036408 N
LPERR01G08190 Leersia perrieri LPERR01G08190 N
MDP0000173550 Malus domestica MDP0000173550 N
OBART01G08110 Oryza barthii OBART01G08110 I
OBART12G07040 Oryza barthii OBART12G07040 N
OGLUM12G08360 Oryza glumaepatula OGLUM12G08360 N
OLONG_019966 Oryza longistaminata OLONG_019966 N
OMERI12G04670 Oryza meridionalis OMERI12G04670 N
ONIVA12G06900 Oryza nivara ONIVA12G06900 N
ORUFI12G07840 Oryza rufipogon ORUFI12G07840 N
tetur15g03470 Tetranychus urticae tetur15g03470 N
Traes_1DS_5EEED86AD Triticum aestivum Traes_1DS_5EEED86AD N
Traes_3DS_901181FDD Triticum aestivum Traes_3DS_901181FDD N
TRIUR3_27706 Triticum urartu TRIUR3_27706 N