gw.504.9.1 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 gw.504.9.1 T140205_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM12
M10213_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRDM12_01 		0.764 0.812
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw.504.9.1 C2H2 ZF 169 191
gw.504.9.1 C2H2 ZF 197 219
gw.504.9.1 C2H2 ZF 225 249

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCSAG00000018240 Chlorocebus sabaeus ENSCSAG00000018240 I
ENSNLEG00000009319 Nomascus leucogenys ENSNLEG00000009319 I
ENSP00000253159 Macaca fascicularis ENSP00000253159 I
ENSPPYG00000009250 Pongo abelii ENSPPYG00000009250 I
Zfp236 Mus musculus ENSMUSG00000041258 I
Zfp236 Rattus norvegicus ENSRNOG00000016303 I
ZNF236 Bos taurus ENSBTAG00000017517 I
ZNF236 Callithrix jacchus ENSCJAG00000008039 I
ZNF236 Equus caballus ENSECAG00000005459 I
ZNF236 Homo sapiens ENSG00000130856 D
ZNF236 Monodelphis domestica ENSMODG00000012304 I
ZNF236 Ornithorhynchus anatinus ENSOANG00000005983 I
ZNF236 Pan troglodytes ENSPTRG00000010123 I