CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_026_00228
(
Aquilegia coerulea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Aquca_026_00228
T142548_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_026_00228.1
C2H2 ZF
237
258
FGCRKCGKTFAVRGDWRTHEKN
Aquca_026_00228.1
C2H2 ZF
257
283
KNCGKLWFCICGSDFKHKRSLKDHIRA
Aquca_026_00228.2
C2H2 ZF
216
237
FGCRKCGKTFAVRGDWRTHEKN
Aquca_026_00228.2
C2H2 ZF
236
262
KNCGKLWFCICGSDFKHKRSLKDHIRA
Links
Other
C2H2 ZF
family TFs
Other
Aquilegia coerulea
TFs
254 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ATWHY2
Populus trichocarpa
POPTR_0003s04700
N
0.000
ATWHY2
Arabidopsis lyrata
scaffold_202038.1
N
0.000
Bostr.10273s0220
Boechera stricta
Bostr.10273s0220
N
0.000
Bra016150
Brassica rapa
Bra016150
N
0.000
Cagra.0147s0016
Capsella grandiflora
Cagra.0147s0016
N
0.000
Carubv10020880m.g
Capsella rubella
Carubv10020880m.g
N
0.000
MLOC_19666
Hordeum vulgare
MLOC_19666
N
0.000
SapurV1A.0002s0060
Salix purpurea
SapurV1A.0002s0060
N
0.000
Thhalv10019058m.g
Eutrema salsugineum
Thhalv10019058m.g
N
0.000
WHY2
Arabidopsis thaliana
AT1G71260
N
0.000