gene13234-v1.0-hybrid (Fragaria vesca)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 gene13234-v1.0-hybrid T142956_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna13234.1-v1.0-hybrid C2H2 ZF 132 155

Links

Other C2H2 ZF family TFs
Other Fragaria vesca TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAI60967 Xenopus tropicalis AAI60967 I
Aan_R010399 Calypte anna Aan_R010399 I
ENSAMEG00000008458 Ailuropoda melanoleuca ENSAMEG00000008458 I
ENSAMXG00000004136 Astyanax mexicanus ENSAMXG00000004136 I
ENSCAFG00000011954 Canis familiaris ENSCAFG00000011954 I
ENSCHOG00000011608 Choloepus hoffmanni ENSCHOG00000011608 I
ENSCSAG00000009947 Chlorocebus sabaeus ENSCSAG00000009947 I
ENSDNOG00000034497 Dasypus novemcinctus ENSDNOG00000034497 I
ENSFCAG00000028366 Felis catus ENSFCAG00000028366 I
ENSGMOG00000000538 Gadus morhua ENSGMOG00000000538 I
ENSLOCG00000003156 Lepisosteus oculatus ENSLOCG00000003156 I
ENSMGAG00000007147 Meleagris gallopavo ENSMGAG00000007147 I
ENSMLUG00000001735 Myotis lucifugus ENSMLUG00000001735 I
ENSMMUP00000009460 Macaca fascicularis ENSMMUP00000009460 I
ENSMODG00000023331 Monodelphis domestica ENSMODG00000023331 I
ENSMPUG00000013524 Mustela putorius furo ENSMPUG00000013524 I
ENSNLEG00000002404 Nomascus leucogenys ENSNLEG00000002404 I
ENSOARG00000002962 Ovis aries ENSOARG00000002962 I
ENSOCUG00000006928 Oryctolagus cuniculus ENSOCUG00000006928 I
ENSONIG00000010547 Oreochromis niloticus ENSONIG00000010547 I
ENSOPRG00000013983 Ochotona princeps ENSOPRG00000013983 I
ENSP00000343155-D2 Bos grunniens ENSP00000343155-D2 I
ENSPANG00000000372 Papio anubis ENSPANG00000000372 I
ENSPFOG00000014555 Poecilia formosa ENSPFOG00000014555 I
ENSPPYG00000011678 Pongo abelii ENSPPYG00000011678 I
ENSPVAG00000004528 Pteropus vampyrus ENSPVAG00000004528 I
ENSSHAG00000010795 Sarcophilus harrisii ENSSHAG00000010795 I
ENSSTOG00000004168 Ictidomys tridecemlineatus ENSSTOG00000004168 I
ENSTBEG00000000324 Tupaia belangeri ENSTBEG00000000324 I
ENSTSYG00000000515 Tarsius syrichta ENSTSYG00000000515 I
ENSXMAG00000002665 Xiphophorus maculatus ENSXMAG00000002665 I
Myotis_brandtii_XBP1_10027497 Myotis brandtii Myotis_brandtii_XBP1_10027497 I
NEMVEDRAFT_v1g211292 Nematostella vectensis NEMVEDRAFT_v1g211292 I
Pvit_02423 Pogona vitticeps Pvit_02423 I
XBP1 Cavia porcellus ENSCPOG00000007796 I
XBP1 Callithrix jacchus ENSCJAG00000020084 I
xbp1 Takifugu rubripes ENSTRUG00000016185 I
XBP1 Tetraodon nigroviridis ENSTNIG00000015621 I
XBP1 Taeniopygia guttata ENSTGUG00000007938 I
XBP1 Bos taurus ENSBTAG00000005970 I
xbp1 Xenopus tropicalis XB-GENE-487124 I
XBP1 Gorilla gorilla ENSGGOG00000007154 I
XBP1 Sorex araneus ENSSARG00000002418 I
Xbp1 Rattus norvegicus ENSRNOG00000010298 I
XBP1 Pan troglodytes ENSPTRG00000014210 I
xbp1 Danio rerio ENSDARG00000035622 I
XBP1 Ornithorhynchus anatinus ENSOANG00000008817 I
XBP1 Equus caballus ENSECAG00000014780 I
Xbp1 Mus musculus ENSMUSG00000020484 D
XBP1 Homo sapiens ENSG00000100219 D
xbp1 Gasterosteus aculeatus ENSGACG00000014266 I
XBP1 Macaca mulatta ENSMMUG00000007215 I
XBP1 Gallus gallus ENSGALG00000005796 I
XBP1 Microcebus murinus ENSMICG00000004235 I
XBP1 Loxodonta africana ENSLAFG00000029029 I
xbp1.L Xenopus laevis XB-GENE-487128 I