CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.004G037000
(
Gossypium raimondii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gorai.004G037000
T143005_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.004G037000.1
C2H2 ZF
267
288
FVCRKCEKAFAVKGDWRTHEKN
Gorai.004G037000.1
C2H2 ZF
287
313
KNCGKVWYCICGSDFKHKRSLKDHTKA
Links
Other
C2H2 ZF
family TFs
Other
Gossypium raimondii
TFs
250 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00006p00259200
Amborella trichopoda
AMTR_s00006p00259200
I
BGIOSGA007184
Oryza indica
BGIOSGA007184
N
BRADI3G02980
Brachypodium distachyon
BRADI3G02980
N
F775_12975
Aegilops tauschii
F775_12975
N
GRMZM2G361611
Zea mays
GRMZM2G361611
N
GRMZM2G444748
Zea mays
GRMZM2G444748
N
gw1.83.117.1
Physcomitrella patens
gw1.83.117.1
I
MLOC_63436
Hordeum vulgare
MLOC_63436
N
OBART02G02570
Oryza barthii
OBART02G02570
N
OGLUM02G02590
Oryza glumaepatula
OGLUM02G02590
N
ONIVA02G02510
Oryza nivara
ONIVA02G02510
N
OPUNC02G02000
Oryza punctata
OPUNC02G02000
N
ORGLA02G0024700
Oryza glaberrima
ORGLA02G0024700
N
ORUFI02G02580
Oryza rufipogon
ORUFI02G02580
N
OS02G0132500
Oryza sativa
OS02G0132500
N
Sb04g002700
Sorghum bicolor
Sb04g002700
N