Gorai.008G169500 (Gossypium raimondii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gorai.008G169500 T143051_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SGR5
M06805_2.00 		Arabidopsis thaliana
WTTTTGTCTTWTHYD
HRDAWAAGACAAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_col_a 		0.796 0.884
SGR5
M06806_2.00 		Arabidopsis thaliana
WTTTGTCTYWWHBNN
NNVDWWRAGACAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_colamp_a 		0.796 0.884
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G169500.1 C2H2 ZF 134 155
Gorai.008G169500.1 C2H2 ZF 155 181

Links

Other C2H2 ZF family TFs
Other Gossypium raimondii TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R007733 Calypte anna Aan_R007733 I 0.000
Afo_R009498 Aptenodytes forsteri Afo_R009498 I 0.000
Alligator_sinensis_CCG006997.1 Alligator sinensis Alligator_sinensis_CCG006997.1 I 0.000
Cmyd_10012130 Chelonia mydas Cmyd_10012130 I 0.000
ENSACAG00000010131 Anolis carolinensis ENSACAG00000010131 I 0.000
ENSAMEG00000018009 Ailuropoda melanoleuca ENSAMEG00000018009 I 0.000
ENSAPLG00000015153 Anas platyrhynchos ENSAPLG00000015153 I 0.000
ENSCSAG00000007633 Chlorocebus sabaeus ENSCSAG00000007633 I 0.000
ENSECAG00000015450 Equus caballus ENSECAG00000015450 I 0.000
ENSFALG00000013006 Ficedula albicollis ENSFALG00000013006 I 0.000
ENSGALG00000004073 Gallus gallus ENSGALG00000004073 I 0.000
ENSMGAG00000004157_CONSTRUCT PBM CONSTRUCTS ENSMGAG00000004157_CONSTRUCT D 0.000
ENSMPUG00000012204 Mustela putorius furo ENSMPUG00000012204 I 0.000
ENSNLEG00000011782 Nomascus leucogenys ENSNLEG00000011782 I 0.000
ENSOANG00000015049 Ornithorhynchus anatinus ENSOANG00000015049 I 0.000
ENSOARG00000005141 Ovis aries ENSOARG00000005141 I 0.000
ENSOPRG00000005862 Ochotona princeps ENSOPRG00000005862 I 0.000
ENSP00000362748-D1 Bos grunniens ENSP00000362748-D1 I 0.000
ENSPANG00000022122 Papio anubis ENSPANG00000022122 I 0.000
ENSPPYG00000002393 Pongo abelii ENSPPYG00000002393 I 0.000
ENSTGUG00000003754 Taeniopygia guttata ENSTGUG00000003754 I 0.000
ENSTSYG00000006963 Tarsius syrichta ENSTSYG00000006963 I 0.000
Gfo_R013982 Geospiza fortis Gfo_R013982 I 0.000
Myotis_brandtii_TET1_10018894 Myotis brandtii Myotis_brandtii_TET1_10018894 I 0.000
Ogr07249 Ophisaurus gracilis Ogr07249 I 0.000
Pvit_00547 Pogona vitticeps Pvit_00547 I 0.000
Sakowv30045758m.g Saccoglossus kowalevskii Sakowv30045758m.g I 0.000
TET1 Meleagris gallopavo ENSMGAG00000004157 I 0.000
TET1 Bos taurus ENSBTAG00000037756 I 0.000
TET1 Canis familiaris ENSCAFG00000013739 I 0.000
TET1 Callithrix jacchus ENSCJAG00000019005 I 0.000
TET1 Cavia porcellus ENSCPOG00000009306 I 0.000
TET1 Dasypus novemcinctus ENSDNOG00000018763 I 0.000
TET1 Felis catus ENSFCAG00000012673 I 0.000
TET1 Homo sapiens ENSG00000138336 D 0.000
TET1 Gorilla gorilla ENSGGOG00000011822 I 0.000
TET1 Loxodonta africana ENSLAFG00000006171 I 0.000
TET1 Procavia capensis ENSPCAG00000007795 I 0.000
TET1 Macaca mulatta ENSMMUG00000023198 I 0.000
TET1 Vicugna pacos ENSVPAG00000011820 I 0.000
TET1 Tursiops truncatus ENSTTRG00000001566 I 0.000
TET1 Oryctolagus cuniculus ENSOCUG00000013277 I 0.000
TET1 Otolemur garnettii ENSOGAG00000034454 I 0.000
TET1 Sorex araneus ENSSARG00000011693 I 0.000
TET1 Pteropus vampyrus ENSPVAG00000003593 I 0.000
TET1 Pan troglodytes ENSPTRG00000002558 I 0.000