CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PredSwiss_CON3140.2
(
Pneumocystis carinii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PredSwiss_CON3140.2
T144933_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PredSwiss_CON3140.2
C2H2 ZF
425
450
FICEIIGCEKRFRRSEHLKRHIRSLH
PredSwiss_CON3140.2
C2H2 ZF
456
478
FLCIVCHKRFSRSDNLNQHLRVH
Links
Other
C2H2 ZF
family TFs
Other
Pneumocystis carinii
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGTG_21257
Puccinia graminis
PGTG_21257
N
0.757
PHSY_004928
Pseudozyma hubeiensis
PHSY_004928
N
0.757
PNEG_00916
Pneumocystis murina
PNEG_00916
N
0.827
PredSwiss_ASS2010_870.2
Pneumocystis carinii
PredSwiss_ASS2010_870.2
N
0.827
PSEUBRA_SCAF1g00537
Pseudozyma brasiliensis
PSEUBRA_SCAF1g00537
N
0.757
sr12243
Sporisorium reilianum
sr12243
N
0.757
UHOR_01423
Ustilago hordei
UHOR_01423
N
0.757
UM00946
Ustilago maydis
UM00946
N
0.757