Scas_Contig709.32 (Saccharomyces castellii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Scas_Contig709.32 T144971_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MSN4
M00032_2.00 		Saccharomyces cerevisiae
NYCCCYNN
NNRGGGRN		 PBM
Badis et al.(2008)
MSN4_2121 		0.785 0.826
MSN4
M07462_2.00 		Saccharomyces cerevisiae
CCCCT
AGGGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0342.1 		0.785 0.826
MSN4
M08533_2.00 		Saccharomyces cerevisiae
CCCCT
AGGGG		 Misc
DeBoer et al.(2011)
YKL062W_518 		0.785 0.826
CaO19.4752
M01035_2.00 		Candida albicans
VCCCCYDNNN
NNNHRGGGGB		 PBM
Siggers et al.(2014)
Msn4_orf19.4752Calb 		0.781 0.761
KLLA0_F26961g
M01039_2.00 		Kluyveromyces lactis
CYCCYTD
HARGGRG		 PBM
Siggers et al.(2014)
KLLA0F29691gKlac 		0.761 0.783
MSN2
M00036_2.00 		Saccharomyces cerevisiae
NVCCCCTK
MAGGGGBN		 PBM
Badis et al.(2008)
MSN2_2101 		0.761 0.783
MSN2
M07466_2.00 		Saccharomyces cerevisiae
CCCCY
RGGGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0341.1 		0.761 0.783
MSN2
M08538_2.00 		Saccharomyces cerevisiae
NHYCCKN
NMGGRDN		 Misc
DeBoer et al.(2011)
YMR037C_1380 		0.761 0.783
MSN2
M10399_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MSN2_Q4 		0.761 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig709.32 C2H2 ZF 765 788
Scas_Contig709.32 C2H2 ZF 794 816

Links

Other C2H2 ZF family TFs
Other Saccharomyces castellii TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
13440_YKL062W Saccharomyces mikatae 13440_YKL062W I 0.785
13715_YKL062W Saccharomyces paradoxus 13715_YKL062W I 0.785
14538_YKL062W Saccharomyces bayanus 14538_YKL062W I 0.761
16548_YMR037C Saccharomyces mikatae 16548_YMR037C I 0.761
17169_YMR037C Saccharomyces paradoxus 17169_YMR037C I 0.761
17588_YMR037C Saccharomyces bayanus 17588_YMR037C I 0.761
AACERI_AaceriABR089C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR089C I 0.761
AGOS_ABR089C Ashbya gossypii AGOS_ABR089C I 0.761
BN7_2125 Wickerhamomyces ciferrii BN7_2125 I 0.776
CANTEDRAFT_134781 Candida tenuis CANTEDRAFT_134781 I 0.757
CaO19.12215 Candida albicans CaO19.12215 I 0.781
CaO19.4752 Candida albicans CaO19.4752 D 0.781
CD36_08440 Candida dubliniensis CD36_08440 I 0.781
CLUG_01356 Candida lusitaniae CLUG_01356 I 0.757
CLUG_01356 Clavispora lusitaniae CLUG_01356 I 0.757
CTRG_03253 Candida tropicalis CTRG_03253 I 0.757
DEHA2A08382g Debaryomyces hansenii DEHA2A08382g I 0.757
Ecym_2301 Eremothecium cymbalariae Ecym_2301 I 0.761
fgenesh1_pg.C_chr_7.1000062 Pichia stipitis fgenesh1_pg.C_chr_7.1000062 I 0.757
G210_5389 Candida maltosa G210_5389 I 0.757
GNLVRS01_PISO0E05768g Millerozyma farinosa GNLVRS01_PISO0E05768g I 0.757
GNLVRS01_PISO0F07089g Millerozyma farinosa GNLVRS01_PISO0F07089g I 0.757
KAFR_0A02320 Kazachstania africana KAFR_0A02320 I 0.791
KAFR_0F02070 Kazachstania africana KAFR_0F02070 I 0.761
KLLA0_F26961g Kluyveromyces lactis KLLA0_F26961g D 0.761
KLTH0D08734g Lachancea thermotolerans KLTH0D08734g I 0.761
KLTH0D08734g Kluyveromyces thermotolerans KLTH0D08734g I 0.761
KNAG_0H00550 Kazachstania naganishii KNAG_0H00550 I 0.785
Kpol_1013p21 Vanderwaltozyma polyspora Kpol_1013p21 I 0.761
Kpol_185p3 Vanderwaltozyma polyspora Kpol_185p3 I 0.785
Kwal_8351 Kluyveromyces waltii Kwal_8351 I 0.761
LALA0_S09e05358g Lachancea lanzarotensis LALA0_S09e05358g I 0.766
MSN2 Saccharomyces cerevisiae YMR037C D 0.761
MSN4 Saccharomyces cerevisiae YKL062W D 0.785
NCAS_0A12910 Naumovozyma castellii NCAS_0A12910 I 0.827
NCAS_0H03080 Naumovozyma castellii NCAS_0H03080 I 0.785
NDAI_0B01340 Naumovozyma dairenensis NDAI_0B01340 I 0.761
NDAI_0C00560 Naumovozyma dairenensis NDAI_0C00560 I 0.761
PGUG_01635 Candida guilliermondii PGUG_01635 I 0.757
PGUG_01635 Meyerozyma guilliermondii PGUG_01635 I 0.757
PICST_33273 Scheffersomyces stipitis PICST_33273 I 0.757
SAKL0B11330g Lachancea kluyveri SAKL0B11330g I 0.761
Scas_Contig649.28 Saccharomyces castellii Scas_Contig649.28 I 0.785
Scas_Contig649.29 Saccharomyces castellii Scas_Contig649.29 I 0.785
SKUD_158203 Saccharomyces kudriavzevii SKUD_158203 I 0.785
SU7_1995 Saccharomyces arboricola SU7_1995 I 0.785
SU7_2517 Saccharomyces arboricola SU7_2517 I 0.761
TBLA_0G01920 Tetrapisispora blattae TBLA_0G01920 I 0.761
TBLA_0H02830 Tetrapisispora blattae TBLA_0H02830 I 0.767
TDEL_0B06910 Torulaspora delbrueckii TDEL_0B06910 I 0.785
TPHA_0C02580 Tetrapisispora phaffii TPHA_0C02580 I 0.761
TPHA_0N01460 Tetrapisispora phaffii TPHA_0N01460 I 0.761
ZBAI_03527 Zygosaccharomyces bailii ZBAI_03527 I 0.785
ZBAI_08525 Zygosaccharomyces bailii ZBAI_08525 I 0.785
ZYRO0F01012g Zygosaccharomyces rouxii ZYRO0F01012g I 0.785