CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMU15031804
(
Schmidtea mediterranea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMU15031804
T145182_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15031804
C2H2 ZF
186
207
HCAFCDDVRNRPALLERHLRVH
SMU15031804
C2H2 ZF
214
235
KCQQCYKSFANSSTLKQHMNTH
SMU15031804
C2H2 ZF
241
263
YICSICDQGFAANSNLAFHMEIH
SMU15031804
C2H2 ZF
286
308
HKCRICSKMFSTPSELQSHGYSH
SMU15031804
C2H2 ZF
314
335
YQCEKCDSSYAKYSNYIKHRRK
Links
Other
C2H2 ZF
family TFs
Other
Schmidtea mediterranea
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART03G23720
Oryza barthii
OBART03G23720
N
OBART03G23730
Oryza barthii
OBART03G23730
N
OLONG_009236
Oryza longistaminata
OLONG_009236
N
ONIVA03G25450
Oryza nivara
ONIVA03G25450
N
ORGLA03G0221500
Oryza glaberrima
ORGLA03G0221500
N
ORUFI03G24400
Oryza rufipogon
ORUFI03G24400
N
Pavir.Ib03850
Panicum virgatum
Pavir.Ib03850
N