znf740 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-1219010 T145391_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zfp740
M00784_2.00 		Mus musculus
MCCCCCCNHN
NDNGGGGGGK		 PBM
Weirauch et al.(2013)
pTH2857 		0.803 0.838
Zfp740
M00143_2.00 		Mus musculus
HMCCCCCNNN
NNNGGGGGKD		 PBM
Badis et al.(2009)
Zfp740_0925 		0.803 0.838
Zfp740
M02935_2.00 		Mus musculus
NCCCCCCCAH
DTGGGGGGGN		 SELEX
Jolma et al.(2013)
Zfp740_1 		0.803 0.838
ZNF740
M02891_2.00 		Homo sapiens
VCCCCCCCMY
RKGGGGGGGB		 SELEX
Jolma et al.(2013)
ZNF740_1 		0.787 0.824
ZNF740
M02892_2.00 		Homo sapiens
VCCCCCCCAY
RTGGGGGGGB		 SELEX
Jolma et al.(2013)
ZNF740_2 		0.787 0.824
ZNF740
M04467_2.00 		Homo sapiens
NYVCCCCCCCCAC
GTGGGGGGGGBRN		 SELEX
Yin et al.(2017)
ZNF740_eDBD_HT-SELEX 		0.787 0.824
ZNF740
M04469_2.00 		Homo sapiens
NYNCCCCCCCCAC
GTGGGGGGGGNRN		 SELEX
Yin et al.(2017)
ZNF740_FL_HT-SELEX 		0.787 0.824
ZNF740
M10221_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF740_02 		0.787 0.824
ZNF740
M04468_2.00 		Homo sapiens
YYDCCCCCCCCAY
RTGGGGGGGGHRR		 SELEX
Yin et al.(2017)
ZNF740_eDBD_Methyl-HT-SELEX 		0.787 0.824
ZNF740
M04470_2.00 		Homo sapiens
NYVCCCCCCCCAC
GTGGGGGGGGBRN		 SELEX
Yin et al.(2017)
ZNF740_FL_Methyl-HT-SELEX 		0.787 0.824
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH76952 C2H2 ZF 99 121
AAH76952 C2H2 ZF 127 149
AAH76952 C2H2 ZF 155 176
XP_002936682 C2H2 ZF 124 146
XP_002936682 C2H2 ZF 152 174
XP_002936682 C2H2 ZF 180 201

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000013892 Ailuropoda melanoleuca ENSAMEG00000013892 I
ENSBTAP00000031815-D1 Bos grunniens ENSBTAP00000031815-D1 I
ENSCSAG00000002477 Chlorocebus sabaeus ENSCSAG00000002477 I
ENSMEUG00000004666 Macropus eugenii ENSMEUG00000004666 I
ENSMMUP00000031524 Macaca fascicularis ENSMMUP00000031524 I
ENSMPUG00000002477 Mustela putorius furo ENSMPUG00000002477 I
ENSNLEG00000005277 Nomascus leucogenys ENSNLEG00000005277 I
ENSOARG00000013335 Ovis aries ENSOARG00000013335 I
ENSPANG00000014697 Papio anubis ENSPANG00000014697 I
ENSPPYG00000010260 Pongo abelii ENSPPYG00000010260 I
ENSPTRG00000011309 Pan troglodytes ENSPTRG00000011309 I
ENSSTOG00000022900 Ictidomys tridecemlineatus ENSSTOG00000022900 I
ENSTBEG00000003466 Tupaia belangeri ENSTBEG00000003466 I
IRF3 Ochotona princeps ENSOPRG00000001971 I
IRF3 Canis familiaris ENSCAFG00000003594 I
IRF3 Procavia capensis ENSPCAG00000008633 I
IRF3 Pteropus vampyrus ENSPVAG00000010968 I
Irf3 Rattus norvegicus ENSRNOG00000043388 I
IRF3 Sorex araneus ENSSARG00000006248 I
IRF3 Sus scrofa ENSSSCG00000003178 I
IRF3 Tursiops truncatus ENSTTRG00000005531 I
IRF3 Otolemur garnettii ENSOGAG00000011935 I
IRF3 Oryctolagus cuniculus ENSOCUG00000027558 I
Irf3 Mus musculus ENSMUSG00000003184 D
IRF3 Macaca mulatta ENSMMUG00000022735 I
IRF3 Myotis lucifugus ENSMLUG00000023427 I
IRF3 Microcebus murinus ENSMICG00000001752 I
IRF3 Loxodonta africana ENSLAFG00000028074 I
IRF3 Gorilla gorilla ENSGGOG00000000499 I
IRF3 Homo sapiens ENSG00000126456 D
IRF3 Felis catus ENSFCAG00000006074 I
IRF3 Equus caballus ENSECAG00000018265 I
IRF3 Dasypus novemcinctus ENSDNOG00000040858 I
IRF3 Cavia porcellus ENSCPOG00000026146 I
IRF3 Callithrix jacchus ENSCJAG00000003637 I
Myotis_brandtii_IRF3_10017659 Myotis brandtii Myotis_brandtii_IRF3_10017659 I