znf238.2 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-1219066 T145393_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB42
M08351_2.00 		Homo sapiens
MRCAKCTGS
SCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
B2RXF5_2-4.RCADE 		0.782 0.890
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002940762 C2H2 ZF 377 399
XP_002940762 C2H2 ZF 418 439
XP_002940762 C2H2 ZF 445 467
XP_002940762 C2H2 ZF 473 496

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgeneshMC_pg.C_100057 Mucor circinelloides estExt_fgeneshMC_pg.C_100057 N
estExt_Genewise1.C_90040 Phycomyces blakesleeanus estExt_Genewise1.C_90040 N
fgeneshMC_pg.1_#_194 Mucor circinelloides fgeneshMC_pg.1_#_194 N
fgeneshPB_pg.2__556 Phycomyces blakesleeanus fgeneshPB_pg.2__556 N
fgeneshPB_pg.43__38 Phycomyces blakesleeanus fgeneshPB_pg.43__38 N
gw1.9.437.1 Mucor circinelloides gw1.9.437.1 N
RO3G_04369 Rhizopus oryzae RO3G_04369 N
RO3G_10135 Rhizopus oryzae RO3G_10135 N
RO3G_11503 Rhizopus oryzae RO3G_11503 N
RO3G_13051 Rhizopus oryzae RO3G_13051 N