fezf1 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-985988 T145715_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FEZF1
M08307_2.00 		Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN		 ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE 		0.815 0.986
FEZF1
M08889_2.00 		Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH		 Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C 		0.815 0.986
erm
M03686_2.00 		Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA		 SELEX
Nitta et al.(2015)
CG31670_1 		0.794 0.891
erm
M06128_2.00 		Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM		 B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375 		0.794 0.891
erm
M06129_2.00 		Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV		 B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375 		0.794 0.891
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI21870 C2H2 ZF 260 282
AAI21870 C2H2 ZF 288 310
AAI21870 C2H2 ZF 316 338
AAI21870 C2H2 ZF 344 366
AAI21870 C2H2 ZF 372 394
AAI21870 C2H2 ZF 400 423

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATBZIP25 Arabidopsis lyrata scaffold_502576.1 N 0.000
Bo3g032910 Brassica oleracea Bo3g032910 N 0.000
Bo4g119810 Brassica oleracea Bo4g119810 I 0.000
Bo8g084770 Brassica oleracea Bo8g084770 I 0.000
Bostr.0697s0074 Boechera stricta Bostr.0697s0074 I 0.000
Bra000102 Brassica rapa Bra000102 I 0.000
Bra007083 Brassica rapa Bra007083 I 0.000
Bra014802 Brassica rapa Bra014802 I 0.000
Bra024310 Brassica rapa Bra024310 I 0.000
BZIP25 Arabidopsis thaliana AT3G54620 I 0.000
Cagra.0562s0051 Capsella grandiflora Cagra.0562s0051 I 0.000
Ca_03753 Cicer arietinum Ca_03753 I 0.000
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I 0.000
Cla015037 Citrullus lanatus Cla015037 I 0.000
Cucsa.388800 Cucumis sativus Cucsa.388800 I 0.000
evm.TU.supercontig_52.101 Carica papaya evm.TU.supercontig_52.101 I 0.000
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I 0.000
GSMUA_Achr7G07650_001 Musa acuminata GSMUA_Achr7G07650_001 I 0.000
Lus10018759.g Linum usitatissimum Lus10018759.g I 0.000
MDP0000176747 Malus domestica MDP0000176747 I 0.000
PK05128.1 Cannabis sativa PK05128.1 D 0.000
PK11472.1 Cannabis sativa PK11472.1 I 0.000
Pm020231 Prunus mume Pm020231 I 0.000
PRUPE_ppa005367mg Prunus persica PRUPE_ppa005367mg I 0.000
Thhalv10010426m.g Eutrema salsugineum Thhalv10010426m.g I 0.000