CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002937203
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XP_002937203
T145775_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002937203
C2H2 ZF
534
556
YECNVCSKTFGQLSNLKVHLRVH
XP_002937203
C2H2 ZF
562
584
FKCQTCNKGFTQLAHLQKHFLVH
XP_002937203
C2H2 ZF
590
612
HECQVCHKRFSSTSNLKTHLRLH
XP_002937203
C2H2 ZF
618
640
YQCKLCPAKFTQFVHLKLHKRLH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP14860
Atta cephalotes
ACEP14860
N
0.000
ASIM_0001177701
Anisakis simplex
ASIM_0001177701
N
0.000
EEL_0001074901
Elaeophora elaphi
EEL_0001074901
N
0.000
GD16667
Drosophila simulans
FBgn0188257
N
0.000
GL14769
Drosophila persimilis
FBgn0152373
N
0.000
GPLIN_000819200
Globodera pallida
GPLIN_000819200
N
0.000
GPUH_0000809301
Gongylonema pulchrum
GPUH_0000809301
N
0.000
L892_g7302
Steinernema scapterisci
L892_g7302
N
0.000
LOAG_15212
Loa loa
LOAG_15212
N
0.000
nAv.1.0.1.g03526
Acanthocheilonema viteae
nAv.1.0.1.g03526
N
0.000
nOo.2.0.1.g06132
Onchocerca ochengi
nOo.2.0.1.g06132
N
0.000
OESDEN_08744
Oesophagostomum dentatum
OESDEN_08744
N
0.000
Ogr10463
Ophisaurus gracilis
Ogr10463
N
0.000
PEQ_0000073901
Parascaris equorum
PEQ_0000073901
N
0.000
RPRC011887
Rhodnius prolixus
RPRC011887
N
0.000
Sjc_0121660
Schistosoma japonicum
Sjc_0121660
N
0.000
SNAPOd2T00023082001
Oikopleura dioica
SNAPOd2T00023082001
N
0.000
SNAPOd2T00028278001
Oikopleura dioica
SNAPOd2T00028278001
N
0.000
YQE_11979
Dendroctonus ponderosae
YQE_11979
N
0.000