SAKL0B11330g (Lachancea kluyveri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SAKL0B11330g T146626_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLLA0_F26961g
M01039_2.00 		Kluyveromyces lactis
CYCCYTD
HARGGRG		 PBM
Siggers et al.(2014)
KLLA0F29691gKlac 		0.805 0.848
MSN4
M00032_2.00 		Saccharomyces cerevisiae
NYCCCYNN
NNRGGGRN		 PBM
Badis et al.(2008)
MSN4_2121 		0.781 0.848
MSN4
M07462_2.00 		Saccharomyces cerevisiae
CCCCT
AGGGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0342.1 		0.781 0.848
MSN4
M08533_2.00 		Saccharomyces cerevisiae
CCCCT
AGGGG		 Misc
DeBoer et al.(2011)
YKL062W_518 		0.781 0.848
CAGL0M13189g
M01034_2.00 		Candida glabrata
MYCCBBDNN
NNHVVGGRK		 PBM
Siggers et al.(2014)
CAGL0M13189gCgla 		0.757 0.804
CAGL0F05995g
M01032_2.00 		Candida glabrata
NYCCYYNN
NNRRGGRN		 PBM
Siggers et al.(2014)
CAGL0F05995gCgla 		0.757 0.761
MSN2
M00036_2.00 		Saccharomyces cerevisiae
NVCCCCTK
MAGGGGBN		 PBM
Badis et al.(2008)
MSN2_2101 		0.757 0.761
MSN2
M07466_2.00 		Saccharomyces cerevisiae
CCCCY
RGGGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0341.1 		0.757 0.761
MSN2
M08538_2.00 		Saccharomyces cerevisiae
NHYCCKN
NMGGRDN		 Misc
DeBoer et al.(2011)
YMR037C_1380 		0.757 0.761
MSN2
M10399_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MSN2_Q4 		0.757 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SAKL0B11330g C2H2 ZF 442 465
SAKL0B11330g C2H2 ZF 471 493

Links

Other C2H2 ZF family TFs
Other Lachancea kluyveri TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G69617 Brachypodium distachyon BRADI1G69617 N 0.000
F775_14771 Aegilops tauschii F775_14771 N 0.000
GRMZM2G077045 Zea mays GRMZM2G077045 N 0.000
GRMZM2G342647 Zea mays GRMZM2G342647 N 0.000
GRMZM5G894234 Zea mays GRMZM5G894234 N 0.000
GSMUA_Achr6G11230_001 Musa acuminata GSMUA_Achr6G11230_001 I 0.000
LPERR03G07880 Leersia perrieri LPERR03G07880 N 0.000
MLOC_50895 Hordeum vulgare MLOC_50895 N 0.000
OB03G19030 Oryza brachyantha OB03G19030 N 0.000
OBART03G08740 Oryza barthii OBART03G08740 N 0.000
OGLUM03G08850 Oryza glumaepatula OGLUM03G08850 N 0.000
OLONG_014784 Oryza longistaminata OLONG_014784 N 0.000
OMERI02G18080 Oryza meridionalis OMERI02G18080 N 0.000
OPUNC03G08410 Oryza punctata OPUNC03G08410 N 0.000
ORGLA03G0084800 Oryza glaberrima ORGLA03G0084800 N 0.000
ORUFI03G08860 Oryza rufipogon ORUFI03G08860 N 0.000
Pavir.Ab02919 Panicum virgatum Pavir.Ab02919 I 0.000
Pavir.Ga02302 Panicum virgatum Pavir.Ga02302 I 0.000
Pavir.Ib00786 Panicum virgatum Pavir.Ib00786 N 0.000
PDK_20s1306131g001 Phoenix dactylifera PDK_20s1306131g001 I 0.000
Sb01g042570 Sorghum bicolor Sb01g042570 N 0.000
Traes_4BL_2136196AE Triticum aestivum Traes_4BL_2136196AE N 0.000