BGLB009896 (Biomphalaria glabrata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 BGLB009896 T150798_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.761 0.836
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.761 0.836
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.761 0.836
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.761 0.836
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGLB009896-PA C2H2 ZF 378 400
BGLB009896-PA C2H2 ZF 409 431
BGLB009896-PA C2H2 ZF 435 457
BGLB009896-PA C2H2 ZF 463 485
BGLB009896-PA C2H2 ZF 491 508

Links

Other C2H2 ZF family TFs
Other Biomphalaria glabrata TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BAUCODRAFT_21663 Baudoinia compniacensis BAUCODRAFT_21663 N
CH063_02269 Colletotrichum higginsianum CH063_02269 N
Cob_02783 Colletotrichum orbiculare Cob_02783 N
CSUB01_02125 Colletotrichum sublineola CSUB01_02125 N
DOTSEDRAFT_74725 Dothistroma septosporum DOTSEDRAFT_74725 N
estExt_fgenesh1_pg.C_60133 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_60133 N
estExt_Genewise1Plus.C_chr_110062 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_110062 N
FGRRES_06356 Fusarium graminearum FGRRES_06356 N
MPH_12209 Macrophomina phaseolina MPH_12209 N
Mycgr3G76636 Zymoseptoria tritici Mycgr3G76636 N
MYCTH_2082522 Myceliophthora thermophila MYCTH_2082522 N
SEPMUDRAFT_151753 Sphaerulina musiva SEPMUDRAFT_151753 N
TRIVIDRAFT_148539 Trichoderma virens TRIVIDRAFT_148539 N
UCREL1_3884 Eutypa lata UCREL1_3884 N