BGLB009896 (Biomphalaria glabrata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 BGLB009896 T150798_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.761 0.836
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.761 0.836
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.761 0.836
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.761 0.836
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGLB009896-PA C2H2 ZF 378 400
BGLB009896-PA C2H2 ZF 409 431
BGLB009896-PA C2H2 ZF 435 457
BGLB009896-PA C2H2 ZF 463 485
BGLB009896-PA C2H2 ZF 491 508

Links

Other C2H2 ZF family TFs
Other Biomphalaria glabrata TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CapteG149623 Capitella teleta CapteG149623 I 0.772
Ocbimv22039583m.g Octopus bimaculoides Ocbimv22039583m.g I 0.766
CapteG176021 Capitella teleta CapteG176021 I 0.764
CapteG223614 Capitella teleta CapteG223614 I 0.764
CapteG76620 Capitella teleta CapteG76620 I 0.764
CGI_10023711 Crassostrea gigas CGI_10023711 I 0.764
Cflo_09305--XP_001121064.1_APIME Camponotus floridanus Cflo_09305--XP_001121064.1_APIME I 0.764
CpipJ_CPIJ017517 Culex pipiens CpipJ_CPIJ017517 I 0.761
AAEL005176 Aedes aegypti AAEL005176 I 0.761
AGAP006791 Anopheles gambiae AGAP006791 I 0.761
CPIJ017517 Culex quinquefasciatus CPIJ017517 I 0.761
scrt Drosophila melanogaster FBgn0004880 D 0.761
GF25020 Drosophila ananassae FBgn0102012 I 0.761
GG15174 Drosophila erecta FBgn0107427 I 0.761
GH15771 Drosophila grimshawi FBgn0123242 I 0.761
GI12551 Drosophila mojavensis FBgn0135308 I 0.761
GM11368 Drosophila sechellia FBgn0166311 I 0.761
GM14603 Drosophila sechellia FBgn0169524 I 0.761
GD13794 Drosophila simulans FBgn0185494 I 0.761
GJ16103 Drosophila virilis FBgn0203288 I 0.761
GK17507 Drosophila willistoni FBgn0219506 I 0.761
GE21392 Drosophila yakuba FBgn0238652 I 0.761
L798_11766 Zootermopsis nevadensis L798_11766 I 0.761
LCUP005780 Lucilia cuprina LCUP005780 I 0.761
AATE020159 Anopheles atroparvus AATE020159 I 0.761
ACHR010032 Anopheles christyi ACHR010032 I 0.761
ACOM031685 Anopheles coluzzii ACOM031685 I 0.761
ACUA022497 Anopheles culicifacies ACUA022497 I 0.761
AFAF007486 Anopheles farauti AFAF007486 I 0.761
AFUN002786 Anopheles funestus AFUN002786 I 0.761
AMEC013076 Anopheles melas AMEC013076 I 0.761
AMEM013788 Anopheles merus AMEM013788 I 0.761
AQUA003879 Anopheles quadriannulatus AQUA003879 I 0.761
ASIS022059 Anopheles sinensis ASIS022059 I 0.761
LLOJ003272 Lutzomyia longipalpis LLOJ003272 I 0.761
MDOA005810 Musca domestica MDOA005810 I 0.761
ENSAMXG00000004776 Astyanax mexicanus ENSAMXG00000004776 I 0.756
ENSGMOG00000000629 Gadus morhua ENSGMOG00000000629 I 0.756
ENSONIG00000006007 Oreochromis niloticus ENSONIG00000006007 I 0.756
scrt1b Oryzias latipes ENSORLG00000008641 I 0.756
ENSPFOG00000017719 Poecilia formosa ENSPFOG00000017719 I 0.756
scrt1b Tetraodon nigroviridis ENSTNIG00000018384 I 0.756
scrt1b Takifugu rubripes ENSTRUG00000011637 I 0.756
ENSXMAG00000014491 Xiphophorus maculatus ENSXMAG00000014491 I 0.756