CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L892_g25021
(
Steinernema scapterisci
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
L892_g25021
T154579_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L892_g25021.t1
C2H2 ZF
151
173
FACPTCHKQYCRKSTLKAHMRQH
L892_g25021.t1
C2H2 ZF
179
201
FTCQVCGKCFSQAANLTAHKRVH
L892_g25021.t1
C2H2 ZF
207
229
FECSICLRPFSQSSSLVTHKRTH
L892_g25021.t1
C2H2 ZF
235
257
YPCPHCDKAFTDSSTLTKHLRTH
L892_g25021.t1
C2H2 ZF
263
285
YGCHLCMMRFTQSGNLHRHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Steinernema scapterisci
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0001280301
Anisakis simplex
ASIM_0001280301
N
0.776
BXY_0695300
Bursaphelenchus xylophilus
BXY_0695300
N
0.760
L596_g10849
Steinernema carpocapsae
L596_g10849
N
0.827
L889_g25430
Steinernema feltiae
L889_g25430
N
0.813
Minc07984
Meloidogyne incognita
Minc07984
N
0.763
PTRK_0000715400
Parastrongyloides trichosuri
PTRK_0000715400
N
0.769
RSKR_0000733400
Rhabditophanes kr3021
RSKR_0000733400
N
0.789
SMUV_0000662601
Syphacia muris
SMUV_0000662601
N
0.788
SPAL_0001681000
Strongyloides papillosus
SPAL_0001681000
N
0.766
SSTP_0000180200
Strongyloides stercoralis
SSTP_0000180200
N
0.769
SVE_1807000
Strongyloides venezuelensis
SVE_1807000
N
0.766